SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092901275
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:112859127-112883278
Size: 24151
Super-enhancer rank 1275
Number of SE elements: 15
ChIP density(Case|Control): 13285.4651|2096.3068
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01356 ;
ROSE Overlap ;
ROSE Proximal AKR7A2P1 ; LINC01356 ;
ROSE Closest LINC01356 ;
Lasso RHOC ;
PreSTIGE ;
ABC ;
BETA SLC16A1-AS1 ; SLC16A1 ; LINC01356 ; AKR7A2P1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092901275 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers