SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_092900959
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:202105191-202119023
Size: 13832
Super-enhancer rank 959
Number of SE elements: 9
ChIP density(Case|Control): 14826.5208|1340.3208
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPR37L1 ;
ROSE Overlap ;
ROSE Proximal GPR37L1 ; PTPN7 ; PTPRVP ; ARL8A ;
ROSE Closest GPR37L1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PTPN7 ; GPR37L1 ; ARL8A ; PTPRVP ; LGR6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900959 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers