SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900853
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr5:1476813-1518713
Size: 41900
Super-enhancer rank 853
Number of SE elements: 23
ChIP density(Case|Control): 16240.44|1801.7
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR6075 ;
ROSE Overlap MIR6075 ; LPCAT1 ;
ROSE Proximal SLC6A3 ;
ROSE Closest MIR6075 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR6075 ; SLC6A3 ; SDHAP3 ; LPCAT1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900853 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers