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Super-enhancer overview

SE ID: SE_02_092900851
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr17:38863815-38907514
Size: 43699
Super-enhancer rank 851
Number of SE elements: 18
ChIP density(Case|Control): 18729.3914|4278.1321
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LASP1 ;
ROSE Overlap LASP1 ;
ROSE Proximal LASP1 ; SNORA21 ; CWC25 ; RPL23 ; MIR6779 ; MIR4727 ; C17orf98 ; LINC00672 ;
ROSE Closest LASP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LASP1 ; CWC25 ; RPL23 ; PIP4K2B ; MIR6779 ; LINC00672 ; SNORA21 ; C17orf98 ; MIR4727 ; FBXO47 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900851 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers