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Super-enhancer overview

SE ID: SE_02_092900827
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:151051709-151059633
Size: 7924
Super-enhancer rank 827
Number of SE elements: 4
ChIP density(Case|Control): 15618.204|909.6752
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDC42SE1 ;
ROSE Overlap CDC42SE1 ;
ROSE Proximal CDC42SE1 ; PRUNE ; C1orf56 ; BNIPL ; MLLT11 ; GABPB2 ; FAM63A ;
ROSE Closest CDC42SE1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA FAM63A ; PRUNE ; CERS2 ; C1orf56 ; SEMA6C ; MLLT11 ; CDC42SE1 ; BNIPL ; GABPB2 ; ANXA9 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900827 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers