SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900703
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr17:4940331-4948524
Size: 8193
Super-enhancer rank 703
Number of SE elements: 4
ChIP density(Case|Control): 17111.0805|775.0578
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF167 ;
ROSE Overlap RNF167 ; PFN1 ;
ROSE Proximal ENO3 ; CAMTA2 ; GP1BA ; KIF1C ; C17orf107 ; MIR6865 ; SLC25A11 ; CHRNE ; INCA1 ; MIR6864 ; SPAG7 ;
ROSE Closest RNF167 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC52A1 ; CAMTA2 ; ENO3 ; SLC25A11 ; SPAG7 ; INCA1 ; MIR6864 ; RNF167 ; C17orf107 ; MIR6865 ; CHRNE ; LOC102724009 ; KIF1C ; GP1BA ; PFN1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900703 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers