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Super-enhancer overview

SE ID: SE_02_092900689
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr17:40319944-40345442
Size: 25498
Super-enhancer rank 689
Number of SE elements: 10
ChIP density(Case|Control): 18952.6634|2386.6128
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RARA ;
ROSE Overlap RARA-AS1 ; RARA ;
ROSE Proximal CDC6 ; RARA ; GJD3 ;
ROSE Closest RARA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA RARA ; RARA-AS1 ; TOP2A ; GJD3 ; CDC6 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900689 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers