SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900480
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr2:218356770-218361314
Size: 4544
Super-enhancer rank 480
Number of SE elements: 1
ChIP density(Case|Control): 20400.7424|538.0096
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CATIP-AS2 ;
ROSE Overlap CATIP ; CATIP-AS2 ;
ROSE Proximal CTDSP1 ; MIR26B ; MIR6810 ; SLC11A1 ; PNKD ; CATIP-AS1 ;
ROSE Closest CATIP-AS2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPBAR1 ; MIR6810 ; AAMP ; VIL1 ; PNKD ; SLC11A1 ; CATIP ; CATIP-AS2 ; CTDSP1 ; MIR26B ; TMBIM1 ; MIR6513 ; CATIP-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900480 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers