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Super-enhancer overview

SE ID: SE_02_092900479
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:28280111-28326807
Size: 46696
Super-enhancer rank 479
Number of SE elements: 23
ChIP density(Case|Control): 24356.6336|4454.7984
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MED18;
ROSE Overlap SESN2;
ROSE Proximal MED18; ATPIF1; PHACTR4; DNAJC8;
ROSE Closest MED18;
Lasso DNAJC8; ATPIF1; MED18; PTAFR; AL353354.1;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900479 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers