SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900428
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr3:159782972-159821567
Size: 38595
Super-enhancer rank 428
Number of SE elements: 20
ChIP density(Case|Control): 24666.0645|3566.178
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IQCJ-SCHIP1-AS1 ;
ROSE Overlap IQCJ-SCHIP1 ; SCHIP1 ;
ROSE Proximal SCHIP1 ; IQCJ-SCHIP1-AS1 ;
ROSE Closest IQCJ-SCHIP1-AS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SCHIP1 ; IQCJ-SCHIP1-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900428 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers