SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_092900423
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr5:87270724-87344887
Size: 74163
Super-enhancer rank 423
Number of SE elements: 40
ChIP density(Case|Control): 27447.7263|6207.4431
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC644285 ;
ROSE Overlap RASA1 ; LOC644285 ;
ROSE Proximal LOC55338 ;
ROSE Closest LOC644285 ;
Lasso CCNH ; RASA1 ; AC008394.1 ;
PreSTIGE ;
ABC ;
BETA RASA1 ; LOC644285 ; LOC55338 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900423 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers