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Super-enhancer overview

SE ID: SE_02_092900204
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Mid-gestation placenta
Biosample name: trophoblast__CytT
Genomic region: chr1:205274563-205325379
Size: 50816
Super-enhancer rank 204
Number of SE elements: 27
ChIP density(Case|Control): 34976.6528|5249.2928
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NUAK2 ;
ROSE Overlap NUAK2 ;
ROSE Proximal TMCC2 ; LEMD1-AS1 ; KLHDC8A ;
ROSE Closest NUAK2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA TMCC2 ; DSTYK ; KLHDC8A ; LEMD1-AS1 ; NUAK2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_092900204 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers