SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_082700728
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr1:23556648-23572699
Size: 16051
Super-enhancer rank 728
Number of SE elements: 6
ChIP density(Case|Control): 6425.2153|1773.6355
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: E2F2 ;
ROSE Overlap ID3 ;
ROSE Proximal E2F2 ; LOC101928163 ;
ROSE Closest ID3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MDS2 ; ASAP3 ; E2F2 ; LOC101928163 ; ID3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700728 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers