SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700573
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr6:42977034-42998793
Size: 21759
Super-enhancer rank 573
Number of SE elements: 4
ChIP density(Case|Control): 8094.348|2754.6894
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP2R5D ;
ROSE Overlap PPP2R5D ; PEX6 ;
ROSE Proximal CNPY3 ; PPP2R5D ; KLHDC3 ; MEA1 ; GNMT ; RRP36 ;
ROSE Closest PPP2R5D ;
Lasso PPP2R5D ; RRP36 ; PEX6 ; KLHDC3 ; GNMT ; KLC4 ;
PreSTIGE ;
ABC ;
BETA PTCRA ; CUL7 ; CNPY3 ; MRPL2 ; PPP2R5D ; RRP36 ; PTK7 ; KLC4 ; PEX6 ; KLHDC3 ; C6orf226 ; GNMT ; MEA1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700573 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers