SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700553
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr19:40606848-40625132
Size: 18284
Super-enhancer rank 553
Number of SE elements: 4
ChIP density(Case|Control): 7458.0436|2003.9264
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LTBP4 ;
ROSE Overlap LTBP4 ;
ROSE Proximal SHKBP1 ;
ROSE Closest LTBP4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NUMBL ; LTBP4 ; SPTBN4 ; SHKBP1 ; ADCK4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700553 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers