SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_082700355
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Stomach
Biosample name: normal gastric
Genomic region: chr19:16121091-16144565
Size: 23474
Super-enhancer rank 355
Number of SE elements: 11
ChIP density(Case|Control): 10889.5886|3596.2168
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HSH2D ;
ROSE Overlap HSH2D ; RAB8A ;
ROSE Proximal TPM4 ; FAM32A ; CIB3 ;
ROSE Closest HSH2D ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HSH2D ; LINC00905 ; AP1M1 ; RAB8A ; CIB3 ; FAM32A ; TPM4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_082700355 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers