SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_075600112
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_FG FOXA2 -/-
Genomic region: chr11:19998611-20043251
Size: 44640
Super-enhancer rank 112
Number of SE elements: 13
ChIP density(Case|Control): 40559.904|3888.144
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NAV2 ;
ROSE Overlap NAV2 ;
ROSE Proximal NAV2-AS2 ;
ROSE Closest NAV2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NAV2 ; NAV2-AS2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075600112 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers