SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_075501020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Embryo
Biosample name: ES-derived progenitors_DE FOXA2 -/-
Genomic region: chr3:109331927-109340938
Size: 9011
Super-enhancer rank 1020
Number of SE elements: 3
ChIP density(Case|Control): 18759.0998|877.6714
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DPPA4;
ROSE Overlap DPPA4;
ROSE Proximal DPPA2;
ROSE Closest DPPA4;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_075501020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers