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Super-enhancer overview

SE ID: SE_02_063100527
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-T1_JQ1
Genomic region: chr17:48541020-48557524
Size: 16504
Super-enhancer rank 527
Number of SE elements: 4
ChIP density(Case|Control): 12841.7624|1118.9712
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXB2;
ROSE Overlap HOXB3; HOXB2; HOXB-AS1;
ROSE Proximal HOXB-AS3; HOXB1; MIR10A; HOXB6; HOXB4; HOXB5;
ROSE Closest HOXB2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_063100527 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers