SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200673
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr7:135159963-135178386
Size: 18423
Super-enhancer rank 673
Number of SE elements: 3
ChIP density(Case|Control): 23717.7702|4169.1249
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C7ORF49 ;
ROSE Overlap C7orf49 ; TMEM140 ;
ROSE Proximal C7orf49 ; MIR6509 ; WDR91 ;
ROSE Closest C7orf49 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C7orf49 ; MIR6509 ; WDR91 ; STRA8 ; TMEM140 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200673 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers