SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200546
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr15:89811585-89849473
Size: 37888
Super-enhancer rank 546
Number of SE elements: 6
ChIP density(Case|Control): 28385.6896|6168.1664
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ANPEP ;
ROSE Overlap C15orf38-AP3S2 ; ANPEP ; AP3S2 ;
ROSE Proximal AP3S2 ; MIR5009 ; MESP2 ; MIR5094 ;
ROSE Closest ANPEP ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MIR5094 ; ANPEP ; MESP2 ; AP3S2 ; MESP1 ; ARPIN ; C15orf38-AP3S2 ; MIR5009 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200546 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers