SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_060200127
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: MCF10A_p63shRNA_DMSO
Genomic region: chr5:143393183-143406209
Size: 13026
Super-enhancer rank 127
Number of SE elements: 1
ChIP density(Case|Control): 44125.575|3108.0036
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NR3C1 ;
ROSE Overlap NR3C1 ;
ROSE Proximal NR3C1 ;
ROSE Closest NR3C1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NR3C1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_060200127 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers