SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_058600473
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Chordal
Biosample name: patient-derived chordoma MGH_4
Genomic region: chr8:71828219-71865084
Size: 36865
Super-enhancer rank 473
Number of SE elements: 18
ChIP density(Case|Control): 27239.5485|5253.2625
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MSC;
ROSE Overlap MSC-AS1; MSC;
ROSE Proximal ;
ROSE Closest MSC;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_058600473 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers