SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_057800330
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Blood
Biosample name: MOLM-13_sgSIK3e4
Genomic region: chr19:1018291-1039968
Size: 21677
Super-enhancer rank 330
Number of SE elements: 6
ChIP density(Case|Control): 61480.3074|2982.7552
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CNN2 ;
ROSE Overlap TMEM259 ; RNU6-1 ; RNU6-9 ; CNN2 ;
ROSE Proximal HMHA1 ; ABCA7 ; GRIN3B ; TMEM259 ; WDR18 ;
ROSE Closest CNN2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPX4 ; RNU6-7 ; CNN2 ; HMHA1 ; RNU6-9 ; RNU6-1 ; ABCA7 ; GRIN3B ; WDR18 ; TMEM259 ; RNU6-8 ; POLR2E ; RNU6-2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_057800330 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers