SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_055500123
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Other
Biosample name: HAP1_WT
Genomic region: chr12:57229000-57243939
Size: 14939
Super-enhancer rank 123
Number of SE elements: 3
ChIP density(Case|Control): 53686.2843|2255.789
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NDUFA4L2;
ROSE Overlap NDUFA4L2; SHMT2; STAC3;
ROSE Proximal SHMT2; MIR1228; STAC3; NXPH4;
ROSE Closest NDUFA4L2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_055500123 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers