SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_055500001
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Other
Biosample name: HAP1_WT
Genomic region: chr7:27154279-27175093
Size: 20814
Super-enhancer rank 1
Number of SE elements: 1
ChIP density(Case|Control): 211728.3336|3197.0304
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXA9;
ROSE Overlap MIR196B; HOXA-AS3; HOXA10-HOXA9; HOXA10-AS; HOXA10; HOXA7; HOXA9;
ROSE Proximal HOXA11; HOTTIP; HOXA-AS2; HOXA3; HOXA5; HOXA4; HOXA13; HOXA6; HOXA11-AS;
ROSE Closest HOXA9;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_055500001 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers