SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_042700174
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Colon
Biosample name: HCT116_shPAF1
Genomic region: chr15:92897923-92909924
Size: 12001
Super-enhancer rank 174
Number of SE elements: 1
ChIP density(Case|Control): 93922.2262|1268.5057
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3175 ;
ROSE Overlap LOC100507217 ; CHD2 ; MIR3175 ;
ROSE Proximal ;
ROSE Closest MIR3175 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA CHD2 ; LINC01578 ; MIR3175 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_042700174 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers