SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_041500395
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Stomach
Biosample name: YCC22
Genomic region: chr5:669058-684463
Size: 15405
Super-enhancer rank 395
Number of SE elements: 5
ChIP density(Case|Control): 38158.185|1868.6265
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TPPP ;
ROSE Overlap TPPP ;
ROSE Proximal ;
ROSE Closest TPPP ;
Lasso ;
PreSTIGE ;
ABC NDUFS6 ; BRD9 ; TRIP13 ; LOC100506688 ; CLPTM1L ; LRRC14B ; HRAT5 ; LPCAT1 ; SDHAP3 ; LOC728613 ; PDCD6 ; EXOC3-AS1 ; CEP72 ; LOC100996325 ; MRPL36 ; EXOC3 ; PP7080 ; SLC9A3-AS1 ;
BETA TPPP ; LOC100996325 ; CEP72 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_041500395 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers