SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_023200188
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Tonsil
Biosample name: ILC3
Genomic region: chr3:45941709-45996362
Size: 54653
Super-enhancer rank 188
Number of SE elements: 12
ChIP density(Case|Control): 28528.866|5487.1612
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CXCR6 ;
ROSE Overlap CXCR6 ; FYCO1 ;
ROSE Proximal XCR1 ;
ROSE Closest CXCR6 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA XCR1 ; CCR9 ; FYCO1 ; CXCR6 ; LZTFL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_023200188 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers