SEdb 3.0
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Super-enhancer overview

SE ID: SE_01_003900600
Species: Human
Data source: ENCODE
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562
Genomic region: chr19:58553693-58560935
Size: 7242
Super-enhancer rank 600
Number of SE elements: 1
ChIP density(Case|Control): 23824.7316|1045.7448
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBE2M ;
ROSE Overlap CHMP2A ; LOC100131691 ; UBE2M ;
ROSE Proximal SLC27A5 ; ZBTB45 ; TRIM28 ; MGC2752 ; MZF1 ;
ROSE Closest UBE2M ;
Lasso SLC27A5 ; UBE2 ; ZNF446 ; ZNF497 ; ZNF8 ; ZNF837 ;
PreSTIGE ;
ABC ;
BETA TRIM28 ; SLC27A5 ; MZF1 ; CENPBD1P1 ; ZNF446 ; CHMP2A ; ZBTB45 ; MZF1-AS1 ; MIR6807 ; ZNF324 ; UBE2M ;

Network diagram of super-enhancer and associated genes

Expression of SE_01_003900600 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers