SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_00_004300665
Species: Human
Data source: Roadmap
Biosample type: Tissue
Tissue type: Stomach
Biosample name: stomach_96d
Genomic region: chr5:139292771-139296337
Size: 3566
Super-enhancer rank 665
Number of SE elements: 1
ChIP density(Case|Control): 24930.2626|400.4618
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MATR3;
ROSE Overlap MATR3;
ROSE Proximal MATR3; SNORA74A; PAIP2;
ROSE Closest MATR3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_00_004300665 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers