SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000137648
Gene: TMPRSS4 Gene type: protein_coding
Strand: + External links:
Genomic region: chr11:118077012-118121890 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_133000009 chr11:117900571-118060161 Sample_02_1330 Blood AMU-AML1 9 49 4713 379 22 341 3354 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4,FXYD6
SE_02_084100235 chr11:117930203-118029446 Sample_02_0841 Blood THP-1_untr 235 23 2846 200 17 199 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_131600010 chr11:117930891-118029432 Sample_02_1316 Brain hMGLs_TREM2-R47H 10 30 2827 200 17 199 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_131300017 chr11:117931660-118029410 Sample_02_1313 Brain hMGLs_CD33_SNP 17 35 2806 197 17 197 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_131500022 chr11:117931791-118030054 Sample_02_1315 Brain hMGLs_INPP5D SNP 22 34 2818 197 17 197 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_046000040 chr11:117945404-118028912 Sample_02_0460 Blood ME-1_I-10-49_6h 40 20 2393 172 17 161 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_104900050 chr11:117946507-118053518 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 50 70 3082 242 21 170 1540 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_104800211 chr11:117948351-118030846 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 211 41 2380 168 17 146 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_130400187 chr11:117949025-118033821 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 187 25 2444 175 17 147 1540 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_054800283 chr11:117949623-118029572 Sample_02_0548 Blood THP-1_24h with EtOH 283 20 2300 164 16 146 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_135000031 chr11:117949820-118029561 Sample_02_1350 Leukophereses leukophereses_p456 31 30 2298 164 16 146 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_057500627 chr11:117950220-118029569 Sample_02_0575 Blood MOLM13_sgLKB1e2 627 28 2273 161 15 146 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_131400033 chr11:117974201-118029234 Sample_02_1314 Brain hMGLs_TREM2-KO 33 17 1665 129 13 117 1476 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_02_075100006 chr11:117979076-118053640 Sample_02_0751 Lymphoma Rec-1_WO 6 35 2225 193 17 120 1540 IL10RA,TMPRSS4-AS1,TMPRSS13,TMPRSS4
SE_01_005400043 chr11:117979130-118054092 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 43 6 2234 193 17 120 1540 IL10RA,TMPRSS4,TMPRSS13
SE_02_130300230 chr11:117979533-118028554 Sample_02_1303 Lymphoma RL_tazemetostat 230 14 1485 120 13 107 1476 IL10RA,TMPRSS4-AS1,TMPRSS4
SE_02_073500078 chr11:117979608-118053570 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 78 25 2209 193 17 119 1540 IL10RA,TMPRSS4-AS1,TMPRSS4
SE_02_075000026 chr11:117979648-118029481 Sample_02_0750 Lymphoma Rec-1_GSI 26 24 1511 123 13 106 1476 IL10RA,TMPRSS4-AS1,TMPRSS4
SE_02_001600633 chr11:117985595-118028842 Sample_02_0016 Blood erythroblasts 633 7 1336 111 10 105 1476 IL10RA,TMPRSS4
SE_02_073200096 chr11:117986446-118053275 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 96 17 2025 182 14 118 1460 IL10RA,TMPRSS4-AS1,TMPRSS4
SE_02_073300090 chr11:117986457-118054004 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 90 20 2043 184 14 118 1460 IL10RA,TMPRSS4-AS1,TMPRSS4
SE_02_073000173 chr11:117986501-118028789 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 173 6 1312 111 10 105 1389 IL10RA,TMPRSS4-AS1,TMPRSS4
SE_02_038700265 chr11:118003047-118028130 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 265 17 798 69 5 56 79 IL10RA,TMPRSS4
SE_02_104301250 chr11:118031780-118070533 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1250 21 1148 117 5 45 197 TMPRSS4-AS1,IL10RA,TMPRSS4
SE_02_104701269 chr11:118031805-118079979 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1269 13 1442 151 5 71 330 TMPRSS4,TMPRSS4-AS1,IL10RA
SE_02_045700346 chr11:118032815-118053490 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 346 10 601 63 4 12 0 TMPRSS4-AS1,IL10RA,TMPRSS4
SE_02_045500632 chr11:118033160-118053431 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 632 4 593 61 4 12 0 TMPRSS4-AS1,IL10RA,TMPRSS4
SE_02_104601771 chr11:118035519-118080796 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 1771 18 1345 139 5 72 276 TMPRSS4,TMPRSS4-AS1,IL10RA
SE_02_098800958 chr11:118047274-118083425 Sample_02_0988 Blood K562_EPZ 958 7 1107 107 3 72 276 TMPRSS4,TMPRSS4-AS1,IL10RA
SE_02_104801338 chr11:118047449-118064912 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1338 9 511 50 2 10 142 TMPRSS4-AS1,TMPRSS4
SE_02_051700773 chr11:118060049-118093578 Sample_02_0517 Esophagus TE5 773 10 1023 116 5 96 205 TMPRSS4,TMPRSS4-AS1
SE_02_050600763 chr11:118060049-118093579 Sample_02_0506 Esophagus TE5_1 763 10 1023 116 5 96 205 TMPRSS4,TMPRSS4-AS1
SE_02_082601679 chr11:118072028-118092103 Sample_02_0826 Stomach gastric tumor 1679 7 595 81 3 61 205 TMPRSS4,TMPRSS4-AS1
SE_02_078100647 chr11:118072753-118089490 Sample_02_0781 Lymphoma Pfeiffer_DMSO 647 1 489 72 3 55 205 TMPRSS4,TMPRSS4-AS1
SE_02_025700376 chr11:118074039-118093734 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 376 4 595 84 4 59 205 TMPRSS4
SE_02_124800533 chr11:118074115-118093780 Sample_02_1248 Bladder RT4 533 4 596 85 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_02_047701073 chr11:118074317-118084989 Sample_02_0477 Colon intestinal epithelial organoids_139a 1073 4 317 44 1 42 134 TMPRSS4,TMPRSS4-AS1
SE_02_047801043 chr11:118074367-118084716 Sample_02_0478 Colon normal colon mucosa 1043 5 315 44 1 42 134 TMPRSS4,TMPRSS4-AS1
SE_02_065201127 chr11:118074447-118093607 Sample_02_0652 Tracheobronchial epithelial HTBE_H3N2_mock 1127 8 584 83 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_02_064700500 chr11:118074478-118093669 Sample_02_0647 Tracheobronchial epithelial HTBE_H1N1_mock 500 7 583 82 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_02_125400911 chr11:118074566-118093479 Sample_02_1254 Bladder Bladder tumor Basal1 911 4 578 82 4 59 205 TMPRSS4,TMPRSS4-AS1
SE_00_002000918 chr11:118075931-118111502 Sample_00_0020 Large intestine large-intestine_108d 918 5 1141 162 6 102 718 TMPRSS4,SCN4B
SE_00_003601137 chr11:118076119-118093818 Sample_00_0036 Small intestine small-intestine_108days 1137 3 543 74 4 54 205 TMPRSS4
SE_02_064501867 chr11:118078883-118093711 Sample_02_0645 Tracheobronchial epithelial HTBE_H1N1_18h 1867 7 449 63 4 40 71 TMPRSS4,TMPRSS4-AS1
SE_02_064401048 chr11:118079006-118093681 Sample_02_0644 Tracheobronchial epithelial HTBE_H1N1_12h 1048 5 447 63 4 39 71 TMPRSS4,TMPRSS4-AS1
SE_02_065700655 chr11:118079079-118093500 Sample_02_0657 Tracheobronchial epithelial HTBE_H1N1_06h 655 3 441 63 4 39 71 TMPRSS4,TMPRSS4-AS1
SE_02_046000611 chr11:118081810-118096500 Sample_02_0460 Blood ME-1_I-10-49_6h 611 3 456 69 4 37 138 TMPRSS4,TMPRSS4-AS1,SCN4B
SE_02_045900467 chr11:118082108-118096665 Sample_02_0459 Blood ME-1_DMSO_6h 467 3 456 68 4 37 138 TMPRSS4,TMPRSS4-AS1,SCN4B
SE_02_045300089 chr11:118092618-118198811 Sample_02_0453 Neuroblastoma SJNB3 89 20 3179 385 15 326 4239 SCN2B,AMICA1,SCN4B,TMPRSS4,TMPRSS4-AS1
SE_02_104801253 chr11:118111057-118166167 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1253 8 1602 192 7 175 2762 SCN2B,SCN4B,TMPRSS4,TMPRSS4-AS1,AMICA1
Genomic distribution of SEs associated with TMPRSS4
Genome Browser

The strength of the tissue affected by the gene

Expression of TMPRSS4

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)