Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000232480
Gene: TGFB2-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr1:218344196-218345678 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_157001200 chr1:218295132-218317309 Sample_02_1570 iPSCs EiPSC 1200 4 559 39 1 29 142 RRP15,TGFB2,TGFB2-AS1
SE_02_068000196 chr1:218295419-218314581 Sample_02_0680 Embryo H1 hESC-derived neural progenitor cells_Smad_48hr 196 11 482 29 1 19 142 RRP15,TGFB2,TGFB2-AS1
SE_02_156700702 chr1:218295492-218313653 Sample_02_1567 iPSCs CiPSC 702 4 462 26 1 19 142 RRP15,TGFB2,TGFB2-AS1
SE_04_000101024 chr1:218295532-218318094 Sample_04_0001 Blood heat shocked K562 1024 3 567 43 1 29 142 RRP15,TGFB2,TGFB2-AS1
SE_02_086100712 chr1:218296467-218302425 Sample_02_0861 iPSCs SAH_WT 712 5 153 10 0 5 45 RRP15,TGFB2,TGFB2-AS1
SE_02_068100330 chr1:218297122-218313385 Sample_02_0681 Embryo H1 hESC-derived neural progenitor cells_Smad_72hr 330 11 404 24 0 19 142 RRP15,TGFB2,TGFB2-AS1
SE_02_137400925 chr1:218346656-218384726 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 925 15 1003 48 4 185 138 TGFB2,TGFB2-AS1
SE_02_053400430 chr1:218346677-218385516 Sample_02_0534 Blood vessel Circle of Willis_60y 430 15 1034 48 4 193 138 TGFB2,TGFB2-AS1
SE_02_086701094 chr1:218346684-218395256 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1094 20 1313 56 5 251 138 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_083100961 chr1:218346707-218391451 Sample_02_0831 Umblical vein HUVECs_TNF0min 961 31 1190 52 5 214 137 TGFB2,MIR548F3,TGFB2-AS1
SE_02_147700769 chr1:218347077-218352903 Sample_02_1477 Bone EW-22 769 3 129 13 2 64 27 TGFB2,TGFB2-AS1
SE_02_115100262 chr1:218353613-218413589 Sample_02_1151 Mammary gland MCF-7_UNTR 262 38 1678 61 8 238 807 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_093801306 chr1:218364899-218381283 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 1306 9 450 26 1 70 0 TGFB2,TGFB2-AS1
SE_02_126200967 chr1:218364993-218384777 Sample_02_1262 Bone Im-GCT-3504_G34W 967 9 545 26 2 78 0 TGFB2,TGFB2-AS1
SE_02_137901124 chr1:218369473-218384804 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 1124 9 421 16 2 69 0 TGFB2,TGFB2-AS1
SE_02_057101061 chr1:218369534-218381345 Sample_02_0571 Brain LN229_1mM_glucose_5mM_acetate 1061 8 319 16 1 61 0 TGFB2,TGFB2-AS1
SE_02_111500336 chr1:218369945-218385342 Sample_02_1115 Liver HepG2 336 10 427 16 2 77 0 TGFB2,TGFB2-AS1
SE_02_102500878 chr1:218370577-218410137 Sample_02_1025 Esophagus KYSE150 878 10 1105 37 8 199 548 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_111300376 chr1:218370987-218384853 Sample_02_1113 Bone U2OS 376 7 393 16 2 66 0 TGFB2,TGFB2-AS1
SE_02_148100348 chr1:218371127-218409514 Sample_02_1481 Bone MIC 348 17 1075 36 8 197 489 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_074000826 chr1:218371625-218403779 Sample_02_0740 Muscle RH3 826 9 907 29 7 174 0 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_147700061 chr1:218371746-218403475 Sample_02_1477 Bone EW-22 61 8 901 29 7 170 0 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_113600347 chr1:218373627-218384807 Sample_02_1136 Bone U2OS-anaphase/telophase 347 4 325 11 2 38 0 TGFB2,TGFB2-AS1
SE_02_148300779 chr1:218373783-218403202 Sample_02_1483 Bone RD-ES 779 9 836 25 7 138 0 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_148700016 chr1:218373791-218409951 Sample_02_1487 Bone TC-32 16 12 1021 32 8 169 522 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_105200260 chr1:218374360-218399129 Sample_02_1052 Esophagus JH-EsoAd1 260 11 714 18 5 109 0 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_069800443 chr1:218374684-218392773 Sample_02_0698 Lung NCI-H1048-cas9_sgPOU2F3 443 6 516 17 3 73 0 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_02_124000702 chr1:218379165-218393023 Sample_02_1240 Skin MCC13_virus_negative 702 1 391 11 3 58 0 TGFB2,MIR548F3,TGFB2-AS1,TGFB2-OT1
SE_01_009400675 chr1:218393202-218483269 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 675 23 2428 60 57 427 1217 TGFB2,TGFB2-OT1,MIR548F3,TGFB2-AS1

Genomic distribution of SEs associated with TGFB2-AS1

The strength of the tissue affected by the gene


Expression of TGFB2-AS1