Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000174446
Gene: SNAPC5 Gene type: protein_coding
Strand: - External links:
Genomic region: chr15:66490135-66497780 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_061900539 chr15:66454594-66484029 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 539 18 777 93 0 20 89 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_070700567 chr15:66455619-66481639 Sample_02_0707 Pancreas BxPC3 WT 567 9 694 85 0 12 10 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_154101106 chr15:66456402-66481045 Sample_02_1541 Nasopharyngeal HNE1 1106 9 656 80 0 12 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_071201087 chr15:66458105-66463477 Sample_02_0712 Pancreas BxPC3_sgNEG 1087 1 147 12 0 0 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_049200929 chr15:66458619-66484854 Sample_02_0492 Pharyng Detroit 562_LPS 929 9 682 83 0 20 99 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_049100998 chr15:66458693-66484863 Sample_02_0491 Pharyng Detroit 562-Control 998 5 680 83 0 20 100 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_094500464 chr15:66459043-66475654 Sample_02_0945 Brain SF767 464 7 436 47 0 7 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_075200129 chr15:66459316-66477414 Sample_02_0752 Embryo ES-derived progenitors_DE_wild type 129 3 480 52 0 12 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_003800209 chr15:66459599-66477550 Sample_02_0038 Embryo DE 209 3 478 50 0 12 0 MAP2K1,SNORD16,RPL4,SNAPC5,SNORD18A,ZWILCH,SNORD18C,SNORD18B
SE_02_075500087 chr15:66459703-66477402 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 87 3 468 49 0 12 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_004300151 chr15:66460578-66476821 Sample_02_0043 Embryo endodermal CyT49_ES_D2 151 7 433 44 0 8 0 MAP2K1,SNORD16,RPL4,SNAPC5,SNORD18A,ZWILCH,SNORD18C,SNORD18B
SE_00_002400261 chr15:66461537-66477057 Sample_00_0024 Embryo mesendoderm 261 5 419 45 0 8 0 MAP2K1,SNORD16,RPL4,SNAPC5,SNORD18A,ZWILCH,SNORD18C,SNORD18B
SE_02_074501069 chr15:66461660-66474788 Sample_02_0745 Embryo ES derived cardiac progenitor cells_day7 1069 3 352 40 0 4 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_157001488 chr15:66463604-66475217 Sample_02_1570 iPSCs EiPSC 1488 4 302 37 0 5 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_156701239 chr15:66470015-66475295 Sample_02_1567 iPSCs CiPSC 1239 2 121 11 0 5 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_056000868 chr15:66470310-66475143 Sample_02_0560 iPSCs FX52_Cas9-inactive Tet1_CGG sgRNA 868 5 113 11 0 5 0 MAP2K1,SNAPC5,SNORD18A,SNORD18C,RPL4,MIR4512,SNORD18B,ZWILCH,SNORD16
SE_02_057400666 chr15:66499850-66506171 Sample_02_0574 Blood MOLM-13_sgNeg2 666 1 229 25 0 66 510 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_01_001200218 chr15:66499936-66506585 Sample_01_0012 Lung A549_dexamethasone_1h 218 1 232 27 0 66 498 SNORD18A,RPL4,SNORD18C,ZWILCH,SNORD18B,SNORD16,SNAPC5
SE_02_031000746 chr15:66499979-66506862 Sample_02_0310 Neuroblastoma SJNB8 746 1 239 27 0 66 495 SNORD18A,RPL4,SNORD18C,ZWILCH,SNORD18B,SNORD16,SNAPC5
SE_02_058200707 chr15:66500046-66506149 Sample_02_0582 Blood MOLM13_SIK3TQ_HG 707 1 218 24 0 66 489 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_02_134000843 chr15:66500087-66506260 Sample_02_1340 Blood acute myeloid leukemia 843 1 219 24 0 63 480 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_02_058100720 chr15:66500267-66506246 Sample_02_0581 Blood MOLM13_empty_HG 720 1 215 23 0 62 470 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_02_057700628 chr15:66500322-66506120 Sample_02_0577 Blood MOLM13_empty 628 1 213 23 0 62 463 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_02_066000713 chr15:66500448-66506647 Sample_02_0660 Mammary gland MCF10DCIS 713 1 224 24 0 61 457 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_02_076000609 chr15:66500677-66506315 Sample_02_0760 Ovary BIN-67_SMARCA4 609 1 205 22 0 61 434 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_02_113800896 chr15:66500950-66506199 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 896 1 195 21 0 60 420 ZWILCH,RPL4,SNORD18B,SNORD18C,SNORD16,SNORD18A,SNAPC5,MIR4512
SE_02_113600594 chr15:66501362-66506685 Sample_02_1136 Bone U2OS-anaphase/telophase 594 1 191 20 0 52 388 SNORD18B,RPL4,SNORD16,SNORD18A,ZWILCH,SNAPC5,SNORD18C,MIR4512
SE_02_148200830 chr15:66501408-66506174 Sample_02_1482 Bone POE 830 1 177 17 0 50 384 SNORD18B,RPL4,SNORD16,SNORD18A,ZWILCH,SNAPC5,SNORD18C,MIR4512
SE_02_057600714 chr15:66501411-66506565 Sample_02_0576 Blood HEL_sgLKB1e2 714 1 186 19 0 50 381 SNORD18B,RPL4,SNORD16,SNORD18A,ZWILCH,SNAPC5,SNORD18C,MIR4512
SE_02_057500904 chr15:66501466-66506122 Sample_02_0575 Blood MOLM13_sgLKB1e2 904 1 174 16 0 45 375 SNORD18B,RPL4,SNORD16,SNORD18A,ZWILCH,SNAPC5,SNORD18C,MIR4512
SE_02_058000631 chr15:66501471-66506376 Sample_02_0580 Blood HEL_sgSIK3e4 631 1 179 17 0 45 374 SNORD18B,RPL4,SNORD16,SNORD18A,ZWILCH,SNAPC5,SNORD18C,MIR4512
SE_02_068300443 chr15:66501501-66506465 Sample_02_0683 Lung DMS114 443 1 178 17 0 45 372 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_02_113901137 chr15:66501525-66506472 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1137 1 176 17 0 45 371 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_02_057900570 chr15:66501568-66506200 Sample_02_0579 Blood HEL_sgNeg2 570 1 171 16 0 45 371 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_02_103700548 chr15:66501716-66506128 Sample_02_1037 Pharynx FaDu Control 548 1 165 14 0 45 356 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_02_066100549 chr15:66501821-66506103 Sample_02_0661 Mammary gland MCF10DCIS-TetTCF7 549 1 160 14 0 44 348 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_02_071200608 chr15:66501837-66506141 Sample_02_0712 Pancreas BxPC3_sgNEG 608 1 160 14 0 44 348 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_02_055500604 chr15:66501997-66506610 Sample_02_0555 Other HAP1_WT 604 1 167 16 0 43 335 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_01_004101019 chr15:66502073-66506382 Sample_01_0041 Skin keratinocyte 1019 1 158 14 0 42 329 ZWILCH,SNORD16,SNORD18A,RPL4,SNORD18B,SNAPC5,SNORD18C
SE_02_127300970 chr15:66502073-66507185 Sample_02_1273 Cervix HeLa 970 1 186 17 0 42 329 SNORD18B,RPL4,SNORD16,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512
SE_02_111400158 chr15:66502389-66505848 Sample_02_1114 Embryonic kidney HEK293 158 1 138 8 0 42 310 SNORD16,RPL4,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512,SNORD18B
SE_02_122801090 chr15:66502512-66506424 Sample_02_1228 Mammary gland MDA-MB-231_2 1090 1 142 10 0 42 312 SNORD16,RPL4,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512,SNORD18B
SE_01_003600518 chr15:66502554-66506577 Sample_01_0036 Cervix HeLa-S3 518 1 147 11 0 42 309 ZWILCH,SNORD16,SNORD18A,RPL4,SNAPC5,SNORD18C,SNORD18B
SE_02_145200926 chr15:66502736-66505842 Sample_02_1452 Arter pulmonary arterial smooth muscle cells_PAH2_sictrl 926 1 126 8 0 37 283 SNORD16,RPL4,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512,SNORD18B
SE_02_070700493 chr15:66502758-66506266 Sample_02_0707 Pancreas BxPC3 WT 493 1 132 9 0 36 288 SNORD16,RPL4,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512,SNORD18B
SE_02_135900719 chr15:66502840-66506208 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 719 1 129 9 0 34 284 SNORD16,RPL4,ZWILCH,SNORD18A,SNAPC5,SNORD18C,MIR4512,SNORD18B

Genomic distribution of SEs associated with SNAPC5

The strength of the tissue affected by the gene


Expression of SNAPC5