SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000171490
Gene: RSL1D1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr16:11833850-11851580 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_032100066 chr16:11668673-11811404 Sample_02_0321 Peripheral blood MO1043_ICN1_HA_H3K27Ac_b 66 20 4498 340 12 377 2757 ZC3H7A,TXNDC11,SNN,BCAR4,RSL1D1
SE_02_098900061 chr16:11668724-11824615 Sample_02_0989 Kidney kidney cortex_WT 61 65 5028 365 12 376 2922 SNN,BCAR4,ZC3H7A,TXNDC11,RSL1D1
SE_02_032000073 chr16:11668832-11811605 Sample_02_0320 Peripheral blood MO1043_ICN1_HA_H3K27Ac_a 73 17 4504 341 12 374 2739 ZC3H7A,TXNDC11,SNN,BCAR4,RSL1D1
SE_02_122400043 chr16:11669843-11810815 Sample_02_1224 Bone marrow normal plasma cell 43 62 4449 339 12 369 2739 SNN,ZC3H7A,TXNDC11,RSL1D1,BCAR4
SE_02_104700694 chr16:11746187-11825865 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 694 29 2663 184 3 142 1382 BCAR4,ZC3H7A,TXNDC11,RSL1D1
SE_01_008400644 chr16:11757496-11825306 Sample_01_0084 Spleen spleen 644 11 2294 146 2 105 1131 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_00_005500286 chr16:11757564-11810785 Sample_00_0055 Spleen spleen 34y 286 15 1709 117 2 105 919 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_093700367 chr16:11757716-11807082 Sample_02_0937 Retinal Pigmented Epithelial RPE190_Con 367 21 1560 107 2 105 919 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_053000200 chr16:11758183-11816146 Sample_02_0530 Mammary gland MCF10A 200 23 1882 125 2 103 919 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_141001146 chr16:11758233-11810956 Sample_02_1410 Brain GSC6 1146 7 1685 116 2 103 919 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_073200258 chr16:11759419-11811111 Sample_02_0732 Lymphoma L20_Mantle cell lymphoma tissue_DMSO 258 10 1660 113 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_008100649 chr16:11759431-11810455 Sample_02_0081 Blood Monocyte-derived_dendritic_cells 649 7 1640 111 2 102 854 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_073100155 chr16:11759553-11811070 Sample_02_0731 Lymphoma J4_Mantle cell lymphoma tissue_THZ1 155 8 1654 113 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_073500113 chr16:11759560-11811102 Sample_02_0735 Lymphoma PAR_Mantle cell lymphoma tissue_THZ1 113 15 1657 113 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_073400104 chr16:11759582-11811039 Sample_02_0734 Lymphoma PAR_Mantle cell lymphoma tissue_DMSO 104 17 1654 113 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_072800289 chr16:11759593-11811122 Sample_02_0728 Lymphoma I10_Mantle cell lymphoma tissue_DMSO 289 9 1657 113 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_072900241 chr16:11759641-11811129 Sample_02_0729 Lymphoma I10_Mantle cell lymphoma tissue_THZ1 241 11 1657 113 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_073300212 chr16:11759707-11811128 Sample_02_0733 Lymphoma L20_Mantle cell lymphoma tissue_THZ1 212 11 1656 113 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_021300389 chr16:11759934-11810818 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 389 7 1643 110 2 102 854 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_01_002000524 chr16:11760009-11811050 Sample_01_0020 Blood B-cell 524 9 1643 110 2 102 854 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_073000205 chr16:11760287-11810930 Sample_02_0730 Lymphoma J4_Mantle cell lymphoma tissue_DMSO 205 9 1634 109 2 102 854 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_142900255 chr16:11761398-11810695 Sample_02_1429 Blood GM12878_WT 255 11 1610 108 2 100 840 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_130400628 chr16:11767426-11813695 Sample_02_1304 Lymphoma RL_lenalidomide_tazemetostat 628 15 1557 112 2 75 614 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_012300281 chr16:11767871-11811403 Sample_02_0123 Haematopoietic and lymphoid tissue GRANTA-519 281 4 1446 105 2 65 591 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_078400407 chr16:11768224-11811205 Sample_02_0784 Blood OSU-CLL 407 10 1425 104 2 65 583 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_146000342 chr16:11769025-11820302 Sample_02_1460 Blood Mutz-3 342 9 1740 118 2 51 622 BCAR4,ZC3H7A,TXNDC11,RSL1D1
SE_02_061200420 chr16:11769216-11810729 Sample_02_0612 Liposarcoma DDLPS_T2 420 12 1382 103 2 48 525 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_081600861 chr16:11769294-11810267 Sample_02_0816 Ovary Clear cell ovarian cancer 861 6 1358 100 2 48 518 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_093500223 chr16:11769625-11802314 Sample_02_0935 Retinal Pigmented Epithelial RPE188_Con 223 13 1077 82 2 48 518 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_085700615 chr16:11770480-11810988 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 615 7 1348 101 2 47 518 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_085500323 chr16:11770958-11810862 Sample_02_0855 Glioblastoma Glioblastoma neurosphere cell_HF-2927 323 6 1339 100 2 42 485 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_147500764 chr16:11771071-11810810 Sample_02_1475 Bone CHLA-25 764 10 1333 100 2 42 476 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_049900936 chr16:11777101-11801633 Sample_02_0499 Fetal lung IMR90 IR Senescence 936 8 832 61 2 30 299 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_059400981 chr16:11777429-11810784 Sample_02_0594 iPSC-derived neural progenitors 981 6 1143 84 2 30 299 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_155400212 chr16:11777747-11813734 Sample_02_1554 Gastrointestinal Stromal GIST-3_KIT e11 212 13 1247 90 2 30 299 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_144500690 chr16:11779202-11825273 Sample_02_1445 Adipose SW872_TAZ4SA 690 9 1653 104 2 30 491 BCAR4,ZC3H7A,TXNDC11,RSL1D1,GSPT1,LITAF
SE_02_088600766 chr16:11779294-11801942 Sample_02_0886 Skin foreskin_ p63KLF4 766 6 768 55 2 27 276 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_139200604 chr16:11779694-11813790 Sample_02_1392 Peripheral blood Mac-2A_ALK- 604 9 1176 84 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_085600271 chr16:11779771-11810810 Sample_02_0856 Glioblastoma Glioblastoma neurosphere cell_HF-3016 271 6 1056 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_01_009000619 chr16:11779957-11810908 Sample_01_0090 Lung upper-lobe-of-left-lung 619 6 1043 76 2 23 259 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_096300511 chr16:11779990-11813784 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 511 6 1160 84 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_01_008500795 chr16:11780105-11811077 Sample_01_0085 Stomach stomach 795 3 1042 76 2 23 259 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_01_011000932 chr16:11780124-11810927 Sample_01_0110 Aorta thoracic aorta_37y 932 9 1040 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_085800336 chr16:11780125-11810691 Sample_02_0858 Glioblastoma Glioblastoma neurosphere cell_HF-3177 336 4 1038 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_026100844 chr16:11780126-11802737 Sample_02_0261 Osteoblastic hFOB_differentiated 844 3 765 56 2 23 259 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_078800308 chr16:11780145-11810675 Sample_02_0788 Brain 3565 308 7 1037 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_118500912 chr16:11780164-11810738 Sample_02_1185 Brain GBM14 912 5 1037 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_118600885 chr16:11780175-11810791 Sample_02_1186 Brain GBM15 885 7 1036 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_026200672 chr16:11780196-11802418 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 672 3 750 55 2 23 259 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_01_009301206 chr16:11780204-11810856 Sample_01_0093 Aorta ascending aorta 1206 10 1035 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_080200112 chr16:11780230-11810529 Sample_02_0802 Brain 3094 112 8 1021 74 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_158300587 chr16:11780279-11802419 Sample_02_1583 Fetal lung IMR90_empty_GM 587 18 749 55 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_026300722 chr16:11780355-11802502 Sample_02_0263 Osteoblastic hFOB_undifferentiated 722 3 748 55 2 23 259 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_127901152 chr16:11780395-11813724 Sample_02_1279 Bone Mesenchymal stem cells 1152 10 1146 84 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_085400488 chr16:11780419-11810780 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 488 3 1025 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_095300584 chr16:11780580-11810793 Sample_02_0953 Brain H3.3K27M_1840 584 9 1022 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_119300796 chr16:11780617-11813829 Sample_02_1193 Brain GBM27 796 7 1137 84 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_01_010400437 chr16:11780692-11810833 Sample_01_0104 Lung upper lobe of left lung 437 11 1019 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_076600995 chr16:11780711-11802266 Sample_02_0766 Ovary PEO1 995 7 726 55 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_137601006 chr16:11780730-11801877 Sample_02_1376 Pancreas Pancreatic_tumor_associated_fibroblasts_B011C_untreated 1006 9 712 54 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_116700885 chr16:11780802-11811049 Sample_02_1167 Biliary H69_TGF Vehicle_1 885 8 1018 76 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_144700454 chr16:11781044-11810497 Sample_02_1447 Adipose SW872_CAMTA1 454 6 998 73 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1,GSPT1,LITAF
SE_02_144800252 chr16:11781186-11810428 Sample_02_1448 Adipose SW872_YAP5SA 252 5 987 72 2 23 259 ZC3H7A,BCAR4,TXNDC11,RSL1D1,GSPT1,LITAF
SE_02_012400980 chr16:11781501-11827225 Sample_02_0124 Embryo Embryonic-stem-cells_Naive 980 5 1648 115 3 21 443 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_00_002700883 chr16:11781662-11810849 Sample_00_0027 Blood natural-killer-cell 883 5 990 74 2 19 217 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_01_008201145 chr16:11781688-11811135 Sample_01_0082 Right lobe of liver right-lobe-of-liver 1145 8 993 74 2 19 217 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_00_003900319 chr16:11781708-11810834 Sample_00_0039 Spleen spleen_3y 319 7 988 74 2 19 217 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_144400451 chr16:11781731-11810562 Sample_02_1444 Adipose SW872_Empty Vector 451 4 978 74 2 19 217 ZC3H7A,BCAR4,TXNDC11,RSL1D1,GSPT1,LITAF
SE_00_005600762 chr16:11781798-11810246 Sample_00_0056 Sigmoid colon sigmoid colon 3y 762 16 964 71 2 19 217 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_02_155300666 chr16:11782208-11813749 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 666 19 1095 82 2 19 209 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_00_000600347 chr16:11782325-11825558 Sample_00_0006 Blood CD14-positive-monocyte 347 5 1563 106 2 18 411 ZC3H7A,BCAR4,TXNDC11,RSL1D1
SE_00_004000541 chr16:11785986-11810879 Sample_00_0040 Spleen spleen_30y 541 6 841 60 2 15 162 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_00_002201210 chr16:11790867-11810875 Sample_00_0022 Lung lung_30y 1210 4 655 45 1 13 162 ZC3H7A,TXNDC11,BCAR4,RSL1D1
SE_02_010000817 chr16:11797307-11825280 Sample_02_0100 Peripheral blood Macrophages_GM-CSF_72h 817 6 1041 63 0 3 253 BCAR4,ZC3H7A,RSL1D1
Genomic distribution of SEs associated with RSL1D1
Genome Browser

The strength of the tissue affected by the gene

Expression of RSL1D1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)