SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000250600
Gene: ROPN1L-AS1 Gene type: lncRNA
Strand: - External links:
Genomic region: chr5:10441290-10441792 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_088900798 chr5:10323443-10401721 Sample_02_0889 Heart left ventricle_LV1183 798 12 2013 65 5 128 565 MARCH6,CMBL,ROPN1L,ROPN1L-AS1
SE_01_009400848 chr5:10348282-10402729 Sample_01_0094 Gastrocnemius medialis gastrocnemius medialis_54y 848 23 1392 50 5 128 638 MARCH6,CMBL,ROPN1L,ROPN1L-AS1
SE_02_122900149 chr5:10348304-10440057 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 149 52 2298 86 7 207 1657 MARCH6,MIR6131,CMBL,ROPN1L,ROPN1L-AS1,CCT5,FAM173B
SE_02_151000418 chr5:10352731-10406178 Sample_02_1510 Lung H3122_LR_Pano 418 16 1369 53 4 139 714 MARCH6,CMBL,ROPN1L,ROPN1L-AS1
SE_02_047401261 chr5:10354159-10401892 Sample_02_0474 Fibroblast umbilical cord Fibroblast 1261 9 1230 45 4 96 393 MARCH6,CMBL,ROPN1L,ROPN1L-AS1
SE_02_104801899 chr5:10446215-10474660 Sample_02_1048 Peripheral blood CD4+ cell_UNTREATED 1899 5 929 58 4 20 232 ROPN1L,MIR6131,LOC101929412,ROPN1L-AS1
SE_02_114500527 chr5:10446327-10491279 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 527 19 1450 72 6 27 232 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_104600474 chr5:10447203-10539539 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 474 35 2849 98 12 56 232 MIR6131,LOC101929412,ROPN1L,ANKRD33B,ROPN1L-AS1
SE_02_043800119 chr5:10452417-10490098 Sample_02_0438 Bone HOS 119 13 1239 62 6 18 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_151000556 chr5:10452447-10490504 Sample_02_1510 Lung H3122_LR_Pano 556 9 1250 62 6 18 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_113701402 chr5:10452922-10489734 Sample_02_1137 Retinal Pigmented Epithelial RPE1-interphase 1402 8 1211 61 6 18 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_136000966 chr5:10452928-10486350 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 966 6 1091 58 6 18 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_113400495 chr5:10452931-10480455 Sample_02_1134 Bone U2OS-interphase 495 5 916 54 6 12 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_086700424 chr5:10452988-10499860 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 424 29 1549 75 6 18 103 MIR6131,LOC101929412,ROPN1L,ROPN1L-AS1
SE_02_144900528 chr5:10452996-10487660 Sample_02_1449 Adipose SW872_YAP_TFE3 528 8 1132 58 6 18 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_155500280 chr5:10453006-10482086 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 280 14 957 58 6 12 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_114900474 chr5:10453016-10480829 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 474 6 925 54 6 12 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_153900297 chr5:10453040-10499697 Sample_02_1539 Nasopharyngeal C666-1 297 20 1540 74 6 18 103 MIR6131,LOC101929412,ROPN1L,ROPN1L-AS1
SE_02_154100885 chr5:10453043-10500189 Sample_02_1541 Nasopharyngeal HNE1 885 9 1552 74 6 18 103 MIR6131,LOC101929412,ROPN1L,ROPN1L-AS1
SE_02_155200314 chr5:10453069-10491123 Sample_02_1552 HMSCs hMSC ATCC SCRC-4000 314 13 1258 61 6 18 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_139800252 chr5:10454105-10499673 Sample_02_1398 Bone U2OS_siNC 252 16 1504 72 6 18 103 MIR6131,LOC101929412,ROPN1L,ROPN1L-AS1
SE_02_139900304 chr5:10454747-10487475 Sample_02_1399 Bone U2OS_siMLL3.1 304 13 1069 55 6 18 103 MIR6131,ROPN1L,LOC101929412,ROPN1L-AS1
SE_02_063800996 chr5:10467333-10490767 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 996 9 745 28 4 12 0 MIR6131,LOC101929412,ROPN1L,ROPN1L-AS1
SE_02_128800053 chr5:10480125-10534767 Sample_02_1288 Lung NCI-H524_p8-15 53 19 1651 35 6 30 0 LOC101929412,MIR6131,ROPN1L,ANKRD33B,ROPN1L-AS1
Genomic distribution of SEs associated with ROPN1L-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of ROPN1L-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)