Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000236671 |
| Gene: | PRKG1-AS1 | Gene type: | lncRNA |
| Strand: | - | External links: |
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| Genomic region: | chr10:52230398-52314507 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_077400148 | chr10:52252349-52273977 |
Sample_02_0774 | Prostate | 22Rv1_delSite1_Clone11/12-D8 | 148 | 7 | 522 | 9 | 1 | 40 | 146 | PRKG1,DKK1,PRKG1-AS1,LINC01468 |
| SE_02_077200105 | chr10:52253455-52273960 |
Sample_02_0772 | Prostate | 22Rv1_delSite1_Clone11/12-F6 | 105 | 9 | 490 | 8 | 1 | 34 | 83 | PRKG1,DKK1,PRKG1-AS1 |
| SE_02_157100205 | chr10:52314215-52335718 |
Sample_02_1571 | Fibroblast | Fibroblast cells | 205 | 4 | 609 | 19 | 1 | 59 | 322 | DKK1,PRKG1-AS1 |
| SE_02_063700566 | chr10:52314248-52324046 |
Sample_02_0637 | Fibroblast | fibroblast_WT_GM07492 | 566 | 5 | 280 | 12 | 0 | 45 | 308 | DKK1,PRKG1-AS1 |
| SE_02_152600432 | chr10:52314251-52321103 |
Sample_02_1526 | Lung | PC9 DMSO | 432 | 2 | 192 | 10 | 0 | 45 | 307 | DKK1,PRKG1-AS1 |
| SE_02_063800799 | chr10:52314274-52336258 |
Sample_02_0638 | Fibroblast | HGPS fibroblast_LMNA_AG11498 | 799 | 6 | 624 | 22 | 1 | 57 | 304 | DKK1,PRKG1-AS1 |
| SE_02_045100642 | chr10:52314307-52353949 |
Sample_02_0451 | Skin | in vitro transformedskin fibroblasts_tumourigenic | 642 | 9 | 1150 | 42 | 2 | 90 | 295 | DKK1,PRKG1-AS1 |
| SE_02_108500620 | chr10:52315175-52321299 |
Sample_02_1085 | Retinal Pigmented Epithelial | hTERT-RPE1 | 620 | 2 | 164 | 8 | 0 | 37 | 119 | DKK1,PRKG1-AS1 |
| SE_02_053100149 | chr10:52315209-52336530 |
Sample_02_0531 | Mammary gland | MDA-MB-231 | 149 | 8 | 600 | 20 | 1 | 51 | 112 | DKK1,PRKG1-AS1 |
| SE_02_156800522 | chr10:52315218-52321015 |
Sample_02_1568 | Heart | Cardiac progenitor cells | 522 | 1 | 157 | 7 | 0 | 37 | 110 | DKK1,PRKG1-AS1 |
| SE_02_076900802 | chr10:52315224-52336353 |
Sample_02_0769 | Ovary | HEYA8 | 802 | 9 | 597 | 20 | 1 | 51 | 110 | DKK1,PRKG1-AS1 |
| SE_02_093900558 | chr10:52315226-52320731 |
Sample_02_0939 | Mammary gland | MDA-MB-231_control | 558 | 2 | 149 | 6 | 0 | 37 | 110 | DKK1,PRKG1-AS1 |
| SE_02_151500283 | chr10:52315246-52338095 |
Sample_02_1515 | Non-transformed mammary epithelial | IMEC WT | 283 | 4 | 654 | 21 | 1 | 51 | 109 | DKK1,PRKG1-AS1 |
| SE_02_066100515 | chr10:52315246-52343004 |
Sample_02_0661 | Mammary gland | MCF10DCIS-TetTCF7 | 515 | 4 | 801 | 27 | 1 | 51 | 109 | DKK1,PRKG1-AS1 |
| SE_02_071600330 | chr10:52315613-52336881 |
Sample_02_0716 | Pancreas | SUIT2_GFP | 330 | 7 | 596 | 18 | 1 | 51 | 107 | DKK1,PRKG1-AS1 |
| SE_02_154100798 | chr10:52316339-52366192 |
Sample_02_1541 | Nasopharyngeal | HNE1 | 798 | 14 | 1478 | 50 | 4 | 95 | 93 | DKK1,PRKG1-AS1 |
| SE_02_113600732 | chr10:52316438-52321437 |
Sample_02_1136 | Bone | U2OS-anaphase/telophase | 732 | 2 | 140 | 6 | 0 | 32 | 81 | DKK1,PRKG1-AS1 |
| SE_02_071500494 | chr10:52316444-52336333 |
Sample_02_0715 | Pancreas | SUIT2_TP63dN | 494 | 5 | 566 | 18 | 1 | 46 | 81 | DKK1,PRKG1-AS1 |
| SE_02_135501112 | chr10:52350344-52360293 |
Sample_02_1355 | Umbilical cord | umbilical cord-derived mesenchymal stem cells_old | 1112 | 2 | 260 | 14 | 1 | 23 | 0 | DKK1,PRKG1-AS1 |
Genomic distribution of SEs associated with PRKG1-AS1