SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000168490
Gene: PHYHIP Gene type: protein_coding
Strand: - External links:
Genomic region: chr8:22219703-22232101 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_03_000800558 chr8:22158930-22195032 Sample_03_0008 Lung A549_dexamethasone_7h 558 5 1250 83 1 241 2252 BMP1,SFTPC,REEP4,NUDT18,HR,LGI3,PHYHIP
SE_03_000700413 chr8:22159152-22194642 Sample_03_0007 Lung A549_dexamethasone_12h 413 5 1227 83 1 235 2157 BMP1,SFTPC,REEP4,NUDT18,HR,LGI3,PHYHIP
SE_02_150200948 chr8:22159156-22189318 Sample_02_1502 Brain SHEP-21N_DOX_24h_NOSPIKE 948 9 1031 62 1 207 1883 BMP1,SFTPC,PHYHIP,REEP4,NUDT18,HR,LGI3
SE_02_150101044 chr8:22159447-22189724 Sample_02_1501 Brain SHEP-21N_NOSPIKE 1044 9 1030 63 1 207 1841 BMP1,SFTPC,PHYHIP,REEP4,HR,LGI3
SE_03_001500508 chr8:22163773-22194609 Sample_03_0015 Lung A549_dexamethasone_8h 508 4 1048 72 1 186 1573 BMP1,SFTPC,REEP4,HR,LGI3,PHYHIP
SE_02_011000863 chr8:22163952-22194440 Sample_02_0110 Ovaries IOE11 863 3 1036 71 1 174 1503 BMP1,SFTPC,REEP4,HR,LGI3,PHYHIP
SE_02_144500654 chr8:22164057-22213781 Sample_02_1445 Adipose SW872_TAZ4SA 654 14 1760 99 4 317 3152 BMP1,SFTPC,POLR3D,PHYHIP,MIR320A,LGI3,HR,REEP4
SE_04_001000236 chr8:22164229-22211321 Sample_04_0010 Lung A549 TGFb 236 7 1653 95 3 291 2846 BMP1,SFTPC,POLR3D,PHYHIP,MIR320A,LGI3,HR,REEP4
SE_02_026200783 chr8:22164251-22195719 Sample_02_0262 Osteoblastic hFOB_JQ1_differentiated 783 3 1063 71 1 197 1648 BMP1,SFTPC,REEP4,HR,LGI3,POLR3D,PHYHIP,MIR320A
SE_02_027400753 chr8:22164278-22191969 Sample_02_0274 Endometriosis hTERT_KD 753 5 923 60 1 158 1221 BMP1,SFTPC,REEP4,HR,LGI3,PHYHIP
SE_02_026100701 chr8:22164293-22195981 Sample_02_0261 Osteoblastic hFOB_differentiated 701 3 1072 71 1 194 1649 BMP1,SFTPC,REEP4,HR,LGI3,POLR3D,PHYHIP,MIR320A
SE_02_103800404 chr8:22164503-22204677 Sample_02_1038 Pharynx FaDu LPS 404 14 1373 83 3 258 2377 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_143801172 chr8:22164641-22194571 Sample_02_1438 Liver LSEC 1172 7 1012 67 1 179 1362 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_093800515 chr8:22164668-22191645 Sample_02_0938 Retinal Pigmented Epithelial RPE190_TnT 515 8 900 57 1 153 1098 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_143601257 chr8:22164693-22194765 Sample_02_1436 Liver LSEC-Ctrl 1257 11 1012 67 1 180 1397 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_061900535 chr8:22164709-22211526 Sample_02_0619 Head and Neck HPV+ HNSCC_SCC-047 535 18 1644 94 4 287 2768 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_143700982 chr8:22164713-22212228 Sample_02_1437 Liver LSEC-TNF 982 14 1675 95 4 297 2936 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_103700396 chr8:22164983-22211065 Sample_02_1037 Pharynx FaDu Control 396 12 1627 92 3 287 2718 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_088101230 chr8:22165172-22193396 Sample_02_0881 Ovary SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT 1230 5 956 63 1 156 1118 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_088300774 chr8:22165172-22193598 Sample_02_0883 Ovary SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W 774 3 964 64 1 157 1118 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_087901299 chr8:22165182-22193094 Sample_02_0879 Ovary SVOG3e cells_Dox_12h_control 1299 6 944 63 1 154 1115 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_126500909 chr8:22167023-22212076 Sample_02_1265 Bone Im-GCT-4072_G34W-repair_WT_D6 909 9 1626 91 4 266 2655 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_151000356 chr8:22167049-22211656 Sample_02_1510 Lung H3122_LR_Pano 356 23 1606 90 4 257 2553 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_086701308 chr8:22167106-22194834 Sample_02_0867 Bone marrow Bone marrow derived hMSC_d0 1308 14 972 63 1 152 1160 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_088201071 chr8:22167136-22193672 Sample_02_0882 Ovary SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W 1071 5 927 61 1 131 960 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_137400583 chr8:22167150-22194664 Sample_02_1374 Pancreas Pancreatic_tumor_associated_fibroblasts_B009B_untreated 583 11 964 63 1 148 1131 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_093601012 chr8:22167155-22193036 Sample_02_0936 Retinal Pigmented Epithelial RPE188_TnT 1012 7 902 59 1 128 960 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_063800872 chr8:22167185-22194123 Sample_02_0638 Fibroblast HGPS fibroblast_LMNA_AG11498 872 9 943 62 1 135 1011 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_077100939 chr8:22167205-22211733 Sample_02_0771 Ovary OVCA429_shGRHL2 939 17 1602 90 4 264 2564 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4,SLC39A14,PIWIL2,FAM160B2,NUDT18
SE_02_126900263 chr8:22167213-22212219 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 263 9 1627 91 4 266 2685 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_086800842 chr8:22167214-22195486 Sample_02_0868 Bone marrow Bone marrow derived hMSC_d10 842 13 992 64 1 153 1251 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_113100682 chr8:22167230-22211715 Sample_02_1131 Pancreas T3M4 wt 682 16 1601 89 4 261 2561 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_126401217 chr8:22167235-22193501 Sample_02_1264 Bone Im-GCT-4072_G34W KO 1217 6 918 59 1 131 960 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_138000542 chr8:22167238-22193069 Sample_02_1380 Pancreas Pancreatic_tumor_associated_fibroblasts_CW1_untreated 542 10 899 58 1 126 960 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_01_011500904 chr8:22167238-22193918 Sample_01_0115 Skeletal Muscle myotube originated from skeletal muscle myoblast 904 9 931 61 1 129 965 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_135900608 chr8:22167280-22211972 Sample_02_1359 Other IC8-deltaEGF-L1596H_GSI_4h 608 14 1611 90 4 262 2635 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_126601031 chr8:22167318-22193450 Sample_02_1266 Bone Im-GCT-4072_G34W-repair_WT_E3 1031 8 911 59 1 128 960 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_111000174 chr8:22167335-22212085 Sample_02_1110 Other HGrC1 174 21 1617 90 4 263 2659 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_046500905 chr8:22167372-22194307 Sample_02_0465 Adipose subcutaneous adipocytes 905 14 943 61 1 133 1049 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_046601078 chr8:22167386-22196493 Sample_02_0466 Adipose visceral adipocytes 1078 25 1023 64 1 159 1402 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_114900522 chr8:22167450-22191968 Sample_02_1149 Kidney WT 9-12_control_Nrf2_SFN 522 6 853 53 1 120 876 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_137701011 chr8:22167475-22211142 Sample_02_1377 Pancreas Pancreatic_tumor_associated_fibroblasts_BF1_untreated 1011 14 1575 88 3 253 2492 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_137900888 chr8:22167555-22191777 Sample_02_1379 Pancreas Pancreatic_tumor_associated_fibroblasts_PS1_untreated 888 10 844 52 1 119 853 BMP1,PHYHIP,SFTPC,REEP4,HR,LGI3
SE_02_113200870 chr8:22167566-22211850 Sample_02_1132 Pancreas KLM1 wt 870 16 1601 89 4 262 2599 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_104301769 chr8:22167633-22207804 Sample_02_1043 Peripheral blood Peripheral blood cells_CTCL1200 1769 13 1436 80 3 240 2338 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_072600262 chr8:22167658-22212066 Sample_02_0726 Mammary gland MCF10A-YAP5SA_plusDOX 262 13 1604 90 4 260 2653 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_047600874 chr8:22170115-22204702 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 874 7 1221 71 3 216 2084 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,HR,REEP4
SE_02_072500438 chr8:22188207-22212733 Sample_02_0725 Mammary gland MCF10A-YAP5SA_ctrl 438 9 914 54 3 164 1903 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,REEP4
SE_02_116801029 chr8:22189921-22199356 Sample_02_1168 Biliary H69_TGF Vehicle_2 1029 1 354 26 0 81 876 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3,REEP4
SE_02_021500369 chr8:22193945-22205131 Sample_02_0215 Skin NHEK_siGRHL3 369 2 412 17 2 95 1108 BMP1,LGI3,POLR3D,PHYHIP,MIR320A,SFTPC
SE_02_116800764 chr8:22199538-22214104 Sample_02_1168 Biliary H69_TGF Vehicle_2 764 1 570 24 3 78 969 BMP1,POLR3D,PHYHIP,MIR320A,SFTPC,LGI3
SE_02_037600170 chr8:22208059-22213746 Sample_02_0376 Skeletal muscle RMS237 170 5 228 11 1 37 418 BMP1,MIR320A,POLR3D,SFTPC,PHYHIP
SE_02_039500788 chr8:22243972-22247345 Sample_02_0395 Mammary gland BT-549 788 1 121 10 0 26 302 POLR3D,MIR320A,PIWIL2,PHYHIP
Genomic distribution of SEs associated with PHYHIP
Genome Browser

The strength of the tissue affected by the gene

Expression of PHYHIP

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)