Gene overview
| Strategies/Algorithm: | proximal | Ensembl ID: | ENSG00000225733 |
| Gene: | FGD5-AS1 | Gene type: | lncRNA |
| Strand: | - | External links: |
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| Genomic region: | chr3:14920347-14948424 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_155300082 | chr3:14758358-14921840 |
Sample_02_1553 | Gastrointestinal Stromal | GIST-2_KIT e11 | 82 | 70 | 4967 | 301 | 27 | 281 | 2326 | C3ORF20,FGD5,FGD5-AS1,NR2C2 |
| SE_00_005500325 | chr3:14783491-14902825 |
Sample_00_0055 | Spleen | spleen 34y | 325 | 29 | 3621 | 231 | 21 | 244 | 1275 | FGD5,FGD5-AS1,NR2C2 |
| SE_02_090800480 | chr3:14792588-14908742 |
Sample_02_0908 | Heart | left ventricle_DCM_LV1262 | 480 | 37 | 3510 | 228 | 20 | 250 | 1386 | FGD5,FGD5-AS1,NR2C2 |
| SE_02_111200155 | chr3:14847762-14910900 |
Sample_02_1112 | T lymphocyte | THP-6 T-ALL | 155 | 13 | 1992 | 137 | 11 | 70 | 844 | FGD5,FGD5-AS1,NR2C2 |
| SE_02_104600992 | chr3:14863637-14936719 |
Sample_02_1046 | Peripheral blood | CD4+ cells_CTCL1145 | 992 | 32 | 2239 | 143 | 6 | 97 | 2017 | FGD5,FGD5-AS1,NR2C2 |
| SE_02_052200109 | chr3:14874674-14909334 |
Sample_02_0522 | Colon | SW620 | 109 | 11 | 1101 | 71 | 2 | 42 | 701 | FGD5,FGD5-AS1,NR2C2 |
| SE_02_063900092 | chr3:14880515-14907187 |
Sample_02_0639 | Blood | T-ALL PDX | 92 | 10 | 857 | 61 | 2 | 22 | 576 | FGD5,FGD5-AS1,NR2C2 |
| SE_02_103600161 | chr3:14944618-14965972 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 161 | 6 | 709 | 54 | 1 | 87 | 624 | FGD5-AS1,NR2C2 |
| SE_02_146800881 | chr3:14945706-14960133 |
Sample_02_1468 | Blood | HUDEP-2_WT | 881 | 2 | 494 | 36 | 1 | 64 | 509 | FGD5-AS1,NR2C2 |
| SE_02_061701215 | chr3:14945918-14951510 |
Sample_02_0617 | HSPC | FL CD34+CD38-/lowCD90+ HSPC | 1215 | 1 | 205 | 14 | 0 | 48 | 498 | FGD5-AS1,NR2C2 |
| SE_02_146600401 | chr3:14946031-14950134 |
Sample_02_1466 | Blood | HUDEP-2_BCL11AKO | 401 | 1 | 156 | 12 | 0 | 48 | 485 | FGD5-AS1,NR2C2 |
| SE_02_058000997 | chr3:14946088-14960040 |
Sample_02_0580 | Blood | HEL_sgSIK3e4 | 997 | 5 | 479 | 35 | 1 | 64 | 483 | FGD5-AS1,NR2C2 |
| SE_02_054500985 | chr3:14946240-14959704 |
Sample_02_0545 | Bone marrow | K562 WT | 985 | 3 | 469 | 35 | 1 | 64 | 481 | FGD5-AS1,NR2C2 |
| SE_02_082100566 | chr3:14946457-14959950 |
Sample_02_0821 | Haematopoietic and lymphoid tissue | SET-2_WT_GSK-LSD1 | 566 | 3 | 466 | 35 | 1 | 64 | 474 | FGD5-AS1,NR2C2 |
| SE_02_103601101 | chr3:14983951-15097470 |
Sample_02_1036 | Mammary gland | HCC70_XY018 | 1101 | 32 | 2926 | 240 | 18 | 298 | 3549 | RBSN,MRPS25,NR2C2,FGD5-AS1 |
Genomic distribution of SEs associated with FGD5-AS1