SEdb 2.0
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Gene overview

Strategies/Algorithm: proximal Ensembl ID: ENSG00000234736
Gene: FAM170B-AS1 Gene type: lncRNA
Strand: + External links:
Genomic region: chr10:49121839-49151547 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_122700137 chr10:49023085-49081931 Sample_02_1227 Bone marrow U266 137 20 1731 174 7 173 216 VSTM4,FAM170B-AS1,MIR4294
SE_00_005100290 chr10:49047587-49113147 Sample_00_0051 Adrenal gland adrenal gland 30y 290 37 1897 184 14 170 592 VSTM4,FAM170B,FAM170B-AS1
SE_02_046500436 chr10:49049008-49118151 Sample_02_0465 Adipose subcutaneous adipocytes 436 24 1991 203 16 178 669 VSTM4,FAM170B,FAM170B-AS1
SE_02_090800975 chr10:49052368-49117765 Sample_02_0908 Heart left ventricle_DCM_LV1262 975 25 1886 193 16 159 669 VSTM4,FAM170B,FAM170B-AS1
SE_02_090100920 chr10:49052757-49115375 Sample_02_0901 Heart left ventricle_LV1471 920 24 1818 183 15 148 553 VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128
SE_02_091301292 chr10:49052807-49115457 Sample_02_0913 Heart left ventricle_DCM_LV1304 1292 20 1819 183 15 148 588 VSTM4,FAM170B,FAM170B-AS1
SE_02_091201133 chr10:49052817-49115297 Sample_02_0912 Heart left ventricle_DCM_LV1300 1133 23 1815 183 15 148 527 VSTM4,FAM170B,FAM170B-AS1
SE_02_091700900 chr10:49053143-49113529 Sample_02_0917 Heart left ventricle_DCM_LV1433 900 17 1754 173 14 142 517 VSTM4,FAM170B,FAM170B-AS1
SE_02_091800887 chr10:49053159-49113724 Sample_02_0918 Heart left ventricle_DCM_LV1437 887 16 1758 173 14 140 517 VSTM4,FAM170B,FAM170B-AS1
SE_02_104602509 chr10:49056361-49110231 Sample_02_1046 Peripheral blood CD4+ cells_CTCL1145 2509 15 1581 154 13 119 517 VSTM4,FAM170B,FAM170B-AS1
SE_01_009300934 chr10:49058283-49118039 Sample_01_0093 Aorta ascending aorta 934 13 1733 176 16 143 669 VSTM4,FAM170B,FAM170B-AS1
SE_01_010600457 chr10:49058773-49083755 Sample_01_0106 Adrenal gland adrenal gland 54y 457 9 747 70 3 67 89 VSTM4,FAM170B-AS1
SE_02_090501078 chr10:49068701-49115399 Sample_02_0905 Heart left ventricle_DCM_LV1033 1078 15 1367 135 14 110 530 VSTM4,FAM170B,FAM170B-AS1
SE_04_000200261 chr10:49154016-49201206 Sample_04_0002 Blood cold shocked K562 261 4 1636 126 4 94 843 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128,C10ORF71
SE_04_000100400 chr10:49154063-49189025 Sample_04_0001 Blood heat shocked K562 400 4 1272 106 4 81 843 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128,C10ORF71
SE_02_109900149 chr10:49154068-49185999 Sample_02_1099 Haematopoietic and lymphoid tissue bone marrow K562_DMSO_noIFNG 149 19 1174 100 4 76 759 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128,C10ORF71
SE_02_098700160 chr10:49154197-49188858 Sample_02_0987 Blood K562_Control_1 160 18 1262 104 4 81 843 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128,C10ORF71
SE_02_098800085 chr10:49154198-49188849 Sample_02_0988 Blood K562_EPZ 85 14 1261 104 4 81 843 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128,C10ORF71
SE_02_122900190 chr10:49155178-49200370 Sample_02_1229 Haematopoietic and lymphoid tissue bone marrow K562_Control 190 13 1583 122 4 88 843 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128,C10ORF71
SE_02_111600498 chr10:49158393-49188710 Sample_02_1116 Haematopoietic and lymphoid tissue bone marrow K562_native 498 12 1131 95 3 73 761 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10ORF71
SE_02_113000192 chr10:49158912-49188944 Sample_02_1130 Haematopoietic and lymphoid tissue bone marrow K562_??Np63?? expressing 192 16 1120 96 3 73 761 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10ORF71
SE_02_054500265 chr10:49158957-49188841 Sample_02_0545 Bone marrow K562 WT 265 12 1115 96 3 73 761 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10ORF71
SE_02_103300462 chr10:49159400-49200871 Sample_02_1033 Haematopoietic and lymphoid tissue bone marrow K562 462 12 1463 116 3 85 761 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10orf128,C10ORF71
SE_02_142300023 chr10:49159676-49186188 Sample_02_1423 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_1h 23 13 1008 90 3 66 677 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10orf71,C10ORF71
SE_02_083301021 chr10:49161209-49190631 Sample_02_0833 Bone marrow TEX-HIST1H3F-K27I-2-Rx_cells 1021 14 1093 89 3 73 645 C10ORF128,VSTM4,FAM170B,FAM170B-AS1
SE_02_142200030 chr10:49161773-49186145 Sample_02_1422 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_0h 30 9 921 78 1 66 489 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10ORF71
SE_02_114500746 chr10:49162645-49180283 Sample_02_1145 Peripheral nerve SNF02.2_PRC2 WT 746 16 708 54 1 49 488 C10ORF128,VSTM4,FAM170B,FAM170B-AS1
SE_02_149400312 chr10:49163104-49190602 Sample_02_1494 Other monocyte-derived dendritic cells_0h 312 9 1014 82 1 73 572 C10ORF128,VSTM4,FAM170B,FAM170B-AS1
SE_02_142400044 chr10:49165400-49185938 Sample_02_1424 Haematopoietic and lymphoid tissue bone marrow K562_Triptolide_4h 44 14 765 71 1 63 437 C10ORF128,VSTM4,FAM170B,FAM170B-AS1,C10ORF71
SE_02_149201025 chr10:49166301-49191058 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 1025 7 895 75 1 69 407 C10ORF128,FAM170B,FAM170B-AS1
SE_02_054700198 chr10:49166501-49186683 Sample_02_0547 Bone marrow K562_MYO1D_Hub_KO 198 6 738 68 1 64 297 C10ORF128,FAM170B,FAM170B-AS1,C10ORF71,VSTM4
SE_02_045600307 chr10:49166731-49195541 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 307 6 1014 86 1 73 361 C10ORF128,FAM170B,FAM170B-AS1
SE_02_045700086 chr10:49167154-49194873 Sample_02_0457 Th17 lymphocytes Th17-IL-10- Day 5 86 10 969 84 1 69 287 C10ORF128,FAM170B,FAM170B-AS1
SE_02_142900874 chr10:49171591-49194746 Sample_02_1429 Blood GM12878_WT 874 8 790 68 1 58 195 C10ORF128,FAM170B,FAM170B-AS1
Genomic distribution of SEs associated with FAM170B-AS1
Genome Browser

The strength of the tissue affected by the gene

Expression of FAM170B-AS1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)