SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: proximal Ensembl ID:
Gene: FAIM3 Gene type:
Strand: External links:
Genomic region: :- Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_006300890 chr1:206864527-206910727 Sample_02_0063 Skin Keratinocytes 890 6 1173 64 16 86 1421 FAIM3,IL20,IL24,PIGR,IL19
SE_02_029400406 chr1:206866774-206911386 Sample_02_0294 Pancreatic L3-6_DMSO 406 6 1146 63 16 70 1261 FAIM3,IL20,IL24,PIGR,IL19
SE_02_005700795 chr1:206872907-206910615 Sample_02_0057 Mammary gland vHMEC 795 8 969 61 15 56 1109 FAIM3,IL24,IL20,PIGR,IL19
SE_02_018000096 chr1:206873067-206910468 Sample_02_0180 melanoma CJM 96 4 959 61 15 56 1100 FAIM3,IL24,IL20,PIGR,IL19
SE_02_017300991 chr1:206873314-206906414 Sample_02_0173 Lung IMR-90_senescent 991 6 848 50 15 50 798 FAIM3,IL24,IL20,PIGR,IL19
SE_01_004100170 chr1:206873344-206911305 Sample_01_0041 Skin keratinocyte 170 6 970 61 15 57 1109 FAIM3,IL24,IL20,PIGR,IL19
SE_02_039601515 chr1:206873750-206910596 Sample_02_0396 Skin NHEK-D 1515 9 951 61 15 55 1109 FAIM3,IL24,IL20,PIGR,IL19
SE_02_027400956 chr1:206884582-206910426 Sample_02_0274 Endometriosis hTERT_KD 956 8 686 52 15 53 1096 FAIM3,IL24,IL20,PIGR
SE_02_015000321 chr1:206884784-206910902 Sample_02_0150 Mammary gland MDA-MB-231_GATA3 321 3 696 52 15 54 1109 FAIM3,IL24,IL20,PIGR
SE_02_001101003 chr1:206884965-206909388 Sample_02_0011 Kidney A-498_wtVHL 1003 8 655 50 15 48 824 FAIM3,IL24,IL20,PIGR
SE_01_005800146 chr1:206886853-206913043 Sample_01_0058 Prostate PC-3 146 3 699 52 14 60 1239 FAIM3,IL24,IL20,PIGR
SE_02_017500892 chr1:206887039-206910015 Sample_02_0175 Lung IMR-90_Etoposide 892 9 619 50 14 49 1004 FAIM3,IL24,IL20,PIGR
SE_02_011200581 chr1:206887060-206910244 Sample_02_0112 Connective tissue HT1080_untreated 581 5 623 50 14 50 1054 FAIM3,IL24,IL20,PIGR
SE_02_018100213 chr1:206887154-206910518 Sample_02_0181 melanoma COLO679 213 3 627 50 14 51 1109 FAIM3,IL24,IL20,PIGR
SE_02_042300259 chr1:206887209-206910402 Sample_02_0423 Skin A375 259 6 621 50 14 50 1096 FAIM3,IL24,IL20,PIGR
SE_02_018400116 chr1:206887232-206911263 Sample_02_0184 Skin SKMEL30 116 7 639 50 14 51 1109 FAIM3,IL24,IL20,PIGR
SE_02_018500343 chr1:206887257-206924877 Sample_02_0185 Skin UACC257 343 4 987 66 17 78 1483 FAIM3,IL24,IL20,PIGR,FCAMR
SE_02_018300337 chr1:206887271-206910752 Sample_02_0183 Skin SKMEL2 337 8 626 50 14 51 1109 FAIM3,IL24,IL20,PIGR
SE_02_020901347 chr1:206887316-206906669 Sample_02_0209 Lung MRC-5_MRC5_1DPT 1347 5 524 41 14 45 798 FAIM3,IL24,IL20,PIGR
SE_02_035900077 chr1:206887365-206912748 Sample_02_0359 Colon Colo741 77 2 669 50 14 57 1198 FAIM3,IL24,IL20,PIGR
SE_03_000100090 chr1:206888312-206911035 Sample_03_0001 Foreskin foreskin-keratinocyte 90 4 613 50 14 50 1109 FAIM3,IL24,IL20,PIGR
SE_02_000500254 chr1:206888606-206907294 Sample_02_0005 Cervical cervical-cancer_KDM5C 254 2 513 43 12 44 798 FAIM3,IL24,IL20,PIGR
SE_02_016600189 chr1:206888977-206911985 Sample_02_0166 Mammary gland HCC1954_Parental 189 3 617 48 12 52 1179 FAIM3,IL24,IL20,PIGR
SE_02_016700171 chr1:206888977-206911985 Sample_02_0167 Mammary gland HCC1954_LCC2 171 3 617 48 12 52 1179 FAIM3,IL24,IL20,PIGR
SE_01_003600202 chr1:206889093-206910838 Sample_01_0036 Cervix HeLa-S3 202 3 590 48 12 50 1109 FAIM3,IL24,IL20,PIGR
SE_02_009600340 chr1:206889102-206911247 Sample_02_0096 Mammary gland ZR-75-1_1 340 2 599 48 12 50 1109 FAIM3,IL24,IL20,PIGR
SE_02_006800447 chr1:206889693-206910429 Sample_02_0068 Skin A375_DMSO 447 8 562 48 12 49 1097 FAIM3,IL24,IL20,PIGR
SE_01_008400138 chr1:206889786-206933718 Sample_01_0084 Spleen spleen 138 10 1182 74 17 93 2150 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_012600498 chr1:206889809-206933634 Sample_02_0126 Blood Induced-regulatory-T-cells_DMSO 498 6 1180 74 17 93 2150 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_013200466 chr1:206889809-206933634 Sample_02_0132 Lung 1015_CL 466 6 1180 74 17 93 2150 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_012700564 chr1:206890011-206932603 Sample_02_0127 Blood Induced-regulatory-T-cells_CPI-703 564 8 1137 73 16 92 2013 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_013100516 chr1:206890011-206932603 Sample_02_0131 Lung 1015_PT 516 8 1137 73 16 92 2013 FAIM3,PIGR,IL24,IL20,FCAMR
SE_00_004000983 chr1:206890076-206931480 Sample_00_0040 Spleen spleen_30y 983 8 1109 72 16 81 1853 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_005600790 chr1:206890198-206910635 Sample_02_0056 Mammary gland HMEC 790 7 551 48 12 50 1109 FAIM3,IL24,IL20,PIGR
SE_02_005200076 chr1:206893746-206912612 Sample_02_0052 Mammary gland MCF-7_E2 76 5 501 39 7 55 1198 FAIM3,IL24,IL20,PIGR
SE_02_023400532 chr1:206895021-206932716 Sample_02_0234 Tonsil Th17 532 7 1004 57 10 91 2038 FAIM3,PIGR,IL24,IL20,FCAMR
SE_00_000700230 chr1:206898620-206931317 Sample_00_0007 Blood naive thymus-derived CD4-positive,alpha-beta T cell 230 3 873 49 8 69 1701 FAIM3,PIGR,IL24,IL20,FCAMR
SE_00_000900260 chr1:206899563-206931561 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 260 5 851 48 7 61 1636 FAIM3,PIGR,IL24,IL20,FCAMR
SE_00_004400379 chr1:206899976-206931717 Sample_00_0044 Cord blood T-cell 379 6 844 45 6 61 1649 FAIM3,PIGR,IL24,IL20,FCAMR
SE_01_002000100 chr1:206900018-206933576 Sample_01_0020 Blood B-cell 100 4 899 47 7 73 1905 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_002200132 chr1:206900069-206930812 Sample_02_0022 Blood CD8donorA 132 14 817 44 5 61 1581 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_023300351 chr1:206900297-206931079 Sample_02_0233 Tonsil Th1 351 6 817 43 5 60 1546 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_002300150 chr1:206900702-206925960 Sample_02_0023 Blood CD8donorC 150 16 659 35 5 56 1157 FAIM3,IL24,IL20,PIGR,FCAMR
SE_02_002500076 chr1:206900884-206933571 Sample_02_0025 Blood CD19donorA 76 19 878 45 7 72 1824 FAIM3,PIGR,IL24,IL20,FCAMR
SE_02_021300655 chr1:206904430-206931511 Sample_02_0213 Burkitts lymphoma of the left maxilla Raji_JQ1 655 3 720 36 4 46 1201 FAIM3,PIGR,IL20,IL24,FCAMR
SE_02_002600163 chr1:206904525-206931258 Sample_02_0026 Blood CD4donorE 163 10 711 35 3 46 1165 FAIM3,PIGR,IL20,IL24,FCAMR
SE_01_002500302 chr1:206904557-206925972 Sample_01_0025 Haematopoietic and lymphoid tissue blood DND-41 302 6 558 28 3 42 813 FAIM3,IL20,PIGR,IL24,FCAMR
SE_02_002400222 chr1:206904837-206931124 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 222 14 698 35 3 46 1113 FAIM3,PIGR,IL20,IL24,FCAMR
SE_00_000800711 chr1:206904977-206925993 Sample_00_0008 Blood CD4-positive-alpha-beta-memory-T-cell 711 3 545 28 3 42 747 FAIM3,IL20,PIGR,IL24,FCAMR
SE_00_000500049 chr1:206905021-206933653 Sample_00_0005 Blood B-cell 49 8 766 38 5 58 1402 FAIM3,PIGR,IL20,IL24,FCAMR
SE_00_003900236 chr1:206905102-206931956 Sample_00_0039 Spleen spleen_3y 236 5 709 36 4 45 1176 FAIM3,PIGR,IL20,IL24,FCAMR
SE_02_023100446 chr1:206905267-206931564 Sample_02_0231 Tonsil ILC1 446 5 696 36 4 44 1077 FAIM3,PIGR,IL20,IL24,FCAMR
SE_02_038700030 chr1:206905400-206935455 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 30 13 808 41 5 65 1503 FAIM3,PIGR,IL20,IL24,FCAMR
SE_01_003000121 chr1:206906661-206932301 Sample_01_0030 Haematopoietic and lymphoid tissue blood GM12878 121 3 674 34 4 37 1152 FAIM3,PIGR,IL20,IL24,FCAMR,FAI3
SE_00_002000766 chr1:206908142-206976190 Sample_00_0020 Large intestine large-intestine_108d 766 6 1902 119 17 203 3155 FAIM3,PIGR,FCAMR,IL20,IL24
SE_00_003600108 chr1:206908230-206977196 Sample_00_0036 Small intestine small-intestine_108days 108 9 1930 120 17 203 3155 FAIM3,PIGR,FCAMR,IL20,IL24
SE_00_002700117 chr1:206912431-206932584 Sample_00_0027 Blood natural-killer-cell 117 6 544 25 4 37 812 FAIM3,PIGR,IL20,IL24,FCAMR
SE_02_011800056 chr1:206913506-206933625 Sample_02_0118 Haematopoietic and lymphoid tissue MINO 56 3 536 23 4 36 872 FAIM3,PIGR,IL20,IL24,FCAMR
SE_02_036300250 chr1:206915945-206931556 Sample_02_0363 Haematopoietic and lymphoid tissue 697 250 4 396 17 3 16 465 FAIM3,PIGR,IL24,FCAMR
SE_02_014800450 chr1:206915994-206931184 Sample_02_0148 Blood CD8_T_cells 450 3 385 16 2 16 426 FAIM3,PIGR,IL24,FCAMR
SE_02_028300014 chr1:206917840-206932628 Sample_02_0283 Peripheral blood p7-CLL-patient_CD74 14 7 369 17 2 26 622 FAIM3,PIGR,IL24,FCAMR
SE_02_012300182 chr1:206919323-206933253 Sample_02_0123 Haematopoietic and lymphoid tissue GRANTA-519 182 2 361 18 3 27 735 FAIM3,PIGR,IL24,FCAMR
SE_02_012200333 chr1:206920451-206932200 Sample_02_0122 Haematopoietic and lymphoid tissue TOLEDO 333 2 307 16 1 15 549 FAIM3,PIGR,IL24,FCAMR
SE_02_012000087 chr1:206920858-206931968 Sample_02_0120 Haematopoietic and lymphoid tissue REC-1 87 2 294 16 1 15 537 FAIM3,PIGR,IL24,FCAMR
SE_00_004500366 chr1:206920955-206925924 Sample_00_0045 Thymus thymus 366 1 122 8 0 11 83 FAIM3,IL24,FCAMR,PIGR
SE_01_005400164 chr1:206921130-206933732 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 164 2 344 17 2 26 750 FAIM3,PIGR,IL24,FCAMR
SE_00_003500091 chr1:206921464-206974095 Sample_00_0035 Sigmoid colon sigmoid-colon 91 12 1492 99 14 180 2553 FAIM3,PIGR,FCAMR,IL24
SE_02_038900006 chr1:206923314-206924811 Sample_02_0389 Peripheral blood CD19+_B_cells_nhl 6 1 27 3 0 1 0 FAIM3,IL24,FCAMR,PIGR
SE_02_038600021 chr1:206923315-206931069 Sample_02_0386 Lymph node CD19+_B_cells_FL1-2 21 4 211 10 0 5 343 PIGR,FAIM3,IL24,FCAMR
SE_02_024200191 chr1:206923605-206982571 Sample_02_0242 Colon V481 191 4 1692 113 14 170 2470 FCAMR,PIGR,FAIM3,IL24
SE_02_039100001 chr1:206923618-206924614 Sample_02_0391 Activated IL4,anti-CD40,IgM,and IgD peripheral blood CD19+_B_cells_Activated_M 1 1 17 2 0 0 0 FAIM3,IL24,FCAMR,PIGR
SE_02_020500077 chr1:206923666-206981568 Sample_02_0205 Stomach Gastric_Primary_Sample_T 77 18 1656 112 14 170 2470 FCAMR,PIGR,FAIM3,IL24
SE_02_025700026 chr1:206923846-207003924 Sample_02_0257 Endometrioid endometrioid_adenocarcinoma_TumorA 26 11 2268 147 16 182 2470 FCAMR,PIGR,IL24,FAIM3,PFKFB2,C1ORF116,YOD1
SE_02_023600073 chr1:206924770-206981769 Sample_02_0236 Colon V206 73 21 1645 110 14 170 2470 FCAMR,PIGR,FAIM3,IL24
SE_02_008600520 chr1:206938298-206959538 Sample_02_0086 Pancreas CAPAN1 520 1 595 38 5 88 569 FCAMR,PIGR,FAIM3,IL24
SE_02_002900005 chr1:206942109-206974600 Sample_02_0029 Colorectal LS174T 5 6 922 68 7 94 1168 FCAMR,PIGR,FAIM3,IL24
SE_02_033700584 chr1:206947833-206971963 Sample_02_0337 Haematopoietic and lymphoid tissue MV411_untreat 584 6 704 55 3 63 980 FCAMR,FAIM3,PIGR
SE_01_005400436 chr1:206950718-206973450 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 436 2 658 53 3 60 980 FCAMR,FAIM3,PIGR
Genomic distribution of SEs associated with FAIM3
Genome Browser

The strength of the tissue affected by the gene

Expression of FAIM3

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)