SEdb 2.0
  1. Search
  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: overlap Ensembl ID: ENSG00000251201
Gene: TMED7-TICAM2 Gene type: protein_coding
Strand: - External links:
Genomic region: chr5:115578642-115626161 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_090101014 chr5:115525134-115600835 Sample_02_0901 Heart left ventricle_LV1471 1014 23 1941 124 4 139 651 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_011000774 chr5:115526966-115603592 Sample_02_0110 Ovaries IOE11 774 7 1995 127 4 128 805 TICAM2,FEM1C,TMED7-TICAM2
SE_02_118500528 chr5:115528670-115584074 Sample_02_1185 Brain GBM14 528 19 1422 97 4 110 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_137800301 chr5:115528857-115586647 Sample_02_1378 Pancreas Pancreatic_tumor_associated_fibroblasts_CAF08_untreated 301 26 1482 102 4 110 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_076201224 chr5:115529846-115586580 Sample_02_0762 Podocyte podocyte_CTL 1224 12 1460 101 4 110 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_010700267 chr5:115530981-115603597 Sample_02_0107 Endometrium EEC16 267 6 1889 122 3 124 805 TICAM2,FEM1C,TMED7-TICAM2
SE_02_048101093 chr5:115531640-115585029 Sample_02_0481 Mammary gland MDA-MB231 1093 15 1375 93 3 110 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_156901160 chr5:115531759-115584090 Sample_02_1569 Endothelial Endothelial cells 1160 10 1352 92 3 110 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_119400832 chr5:115540170-115583994 Sample_02_1194 Brain GBM28 832 12 1168 86 3 107 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_113901221 chr5:115540913-115584074 Sample_02_1139 Retinal Pigmented Epithelial RPE1-anaphase/telophase 1221 8 1150 84 3 106 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_135400703 chr5:115541121-115583908 Sample_02_1354 Mammary gland MDA-MB-231-Erbeta_E2_TNFa 703 10 1144 84 3 104 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_113801101 chr5:115541410-115584035 Sample_02_1138 Retinal Pigmented Epithelial RPE1-prometaphase 1101 7 1143 83 3 104 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_130901023 chr5:115541425-115584032 Sample_02_1309 Artery Pulmonary artery endothelial cells_Control 1023 7 1140 83 3 104 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_135200641 chr5:115541581-115584031 Sample_02_1352 Mammary gland MDA-MB-231-Erbeta_E2 641 9 1135 83 3 104 603 TMED7-TICAM2,FEM1C,TICAM2,LOC101927100
SE_02_152200767 chr5:115564008-115586032 Sample_02_1522 Skin A375 RTKi 767 8 604 46 2 28 264 TMED7-TICAM2,TICAM2,LOC101927100,FEM1C
Genomic distribution of SEs associated with TMED7-TICAM2
Genome Browser

The strength of the tissue affected by the gene

Expression of TMED7-TICAM2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)