Gene overview
| Strategies/Algorithm: | overlap | Ensembl ID: | ENSG00000272767 |
| Gene: | JMJD1C-AS1 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr10:63465229-63466563 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_057700121 | chr10:63454237-63471863 |
Sample_02_0577 | Blood | MOLM13_empty | 121 | 1 | 435 | 32 | 2 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_058200116 | chr10:63455180-63471527 |
Sample_02_0582 | Blood | MOLM13_SIK3TQ_HG | 116 | 1 | 406 | 28 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_099400157 | chr10:63455274-63471367 |
Sample_02_0994 | Blood | MOLM13_SIK3TQ | 157 | 1 | 398 | 28 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_137801394 | chr10:63455454-63494866 |
Sample_02_1378 | Pancreas | Pancreatic_tumor_associated_fibroblasts_CAF08_untreated | 1394 | 12 | 966 | 79 | 6 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_101701004 | chr10:63455542-63517633 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 1004 | 11 | 1542 | 132 | 12 | 32 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_054800262 | chr10:63456076-63472057 |
Sample_02_0548 | Blood | THP-1_24h with EtOH | 262 | 1 | 397 | 27 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_058100141 | chr10:63456100-63471563 |
Sample_02_0581 | Blood | MOLM13_empty_HG | 141 | 1 | 385 | 27 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_133200295 | chr10:63456292-63469717 |
Sample_02_1332 | Blood | Monomac6_CTRL | 295 | 1 | 350 | 26 | 0 | 13 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_057500166 | chr10:63456369-63471470 |
Sample_02_0575 | Blood | MOLM13_sgLKB1e2 | 166 | 1 | 379 | 27 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_134100210 | chr10:63456497-63472171 |
Sample_02_1341 | Blood | MV411 | 210 | 1 | 391 | 26 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_106100776 | chr10:63456505-63493863 |
Sample_02_1061 | Bone | TC71_WT | 776 | 5 | 919 | 72 | 6 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_148800771 | chr10:63456505-63493863 |
Sample_02_1488 | Bone | TC-71 | 771 | 5 | 919 | 72 | 6 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_155700340 | chr10:63457698-63468321 |
Sample_02_1557 | Gastrointestinal Stromal | GIST-6_KIT e11/16 | 340 | 2 | 296 | 25 | 0 | 13 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_046100268 | chr10:63458218-63471427 |
Sample_02_0461 | Blood | MV-4-11-B cells | 268 | 6 | 341 | 25 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_134700211 | chr10:63458804-63469302 |
Sample_02_1347 | Leukophereses | leukophereses_p401 | 211 | 3 | 285 | 21 | 0 | 13 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_106900086 | chr10:63459700-63500486 |
Sample_02_1069 | Bone marrow | Bone marrow aspirate | 86 | 20 | 1013 | 80 | 6 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_099500223 | chr10:63460229-63471210 |
Sample_02_0995 | Blood | MOLM-13_empty vector | 223 | 1 | 279 | 17 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_134400054 | chr10:63460728-63469740 |
Sample_02_1344 | Leukophereses | leukophereses_p217 | 54 | 1 | 240 | 14 | 0 | 13 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_057400175 | chr10:63460803-63471546 |
Sample_02_0574 | Blood | MOLM-13_sgNeg2 | 175 | 1 | 267 | 15 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_057800226 | chr10:63460817-63471217 |
Sample_02_0578 | Blood | MOLM-13_sgSIK3e4 | 226 | 1 | 262 | 15 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_099300257 | chr10:63460941-63469881 |
Sample_02_0993 | Blood | MOLM-13_empty | 257 | 1 | 236 | 14 | 0 | 13 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_133100300 | chr10:63461565-63472147 |
Sample_02_1331 | Blood | Molm13_CTRL | 300 | 1 | 257 | 12 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_125200454 | chr10:63462156-63472195 |
Sample_02_1252 | Bone marrow | RS4_11_DMSO_10h | 454 | 1 | 237 | 11 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_124900474 | chr10:63462418-63472163 |
Sample_02_1249 | Bone marrow | RS4_11_DMSO_4h | 474 | 1 | 231 | 11 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_125000498 | chr10:63463229-63472166 |
Sample_02_1250 | Bone marrow | RS4_11_AZD1775 _4h | 498 | 1 | 206 | 11 | 1 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_094800964 | chr10:63463936-63467593 |
Sample_02_0948 | Pharyng | Detroit562 | 964 | 1 | 104 | 10 | 0 | 13 | 327 | JMJD1C,JMJD1C-AS1 |
| SE_02_075201263 | chr10:63464037-63485772 |
Sample_02_0752 | Embryo | ES-derived progenitors_DE_wild type | 1263 | 6 | 513 | 41 | 3 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
| SE_02_075500869 | chr10:63464224-63486528 |
Sample_02_0755 | Embryo | ES-derived progenitors_DE FOXA2 -/- | 869 | 7 | 527 | 41 | 3 | 14 | 327 | JMJD1C,JMJD1C-AS1,REEP3 |
Genomic distribution of SEs associated with JMJD1C-AS1