Gene overview
| Strategies/Algorithm: | closest_active | Ensembl ID: | ENSG00000243137 |
| Gene: | PSG4 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr19:43192702-43207299 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_087800056 | chr19:43157479-43236351 |
Sample_02_0878 | Ovary | SVOG3e cells_noDox_control | 56 | 19 | 3834 | 499 | 4 | 1 | 1554 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_088200036 | chr19:43158477-43236367 |
Sample_02_0882 | Ovary | SVOG3e_cells_noDox_transduced with V5-FOXL2 C134W | 36 | 18 | 3806 | 495 | 4 | 1 | 1554 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_136100091 | chr19:43178257-43236439 |
Sample_02_1361 | Bladder | UMUC1_sonic_pSIN-puro_WTUTX | 91 | 15 | 2898 | 376 | 3 | 1 | 1253 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_077000304 | chr19:43178371-43236558 |
Sample_02_0770 | Ovary | OVCA429_shLuc | 304 | 20 | 2897 | 376 | 3 | 1 | 1253 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_087900087 | chr19:43179306-43236494 |
Sample_02_0879 | Ovary | SVOG3e cells_Dox_12h_control | 87 | 11 | 2826 | 371 | 3 | 1 | 1253 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_015000057 | chr19:43179309-43226309 |
Sample_02_0150 | Mammary gland | MDA-MB-231_GATA3 | 57 | 4 | 2464 | 331 | 3 | 1 | 1155 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_154900075 | chr19:43179329-43236047 |
Sample_02_1549 | Gastrointestinal Stromal | GIST-430B | 75 | 18 | 2805 | 369 | 3 | 1 | 1253 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_088600519 | chr19:43179400-43225607 |
Sample_02_0886 | Skin | foreskin_ p63KLF4 | 519 | 12 | 2428 | 327 | 3 | 1 | 1155 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_127900358 | chr19:43179468-43225543 |
Sample_02_1279 | Bone | Mesenchymal stem cells | 358 | 8 | 2419 | 327 | 3 | 1 | 1155 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_088000088 | chr19:43180070-43236338 |
Sample_02_0880 | Ovary | SVOG3e cells_noDox_transduced_V5-FOXL2_WT | 88 | 13 | 2769 | 365 | 3 | 1 | 1253 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_127800503 | chr19:43182054-43237202 |
Sample_02_1278 | Chordoma | UCH1_DMSO_48h | 503 | 15 | 2701 | 352 | 3 | 1 | 1253 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_088300676 | chr19:43195804-43205391 |
Sample_02_0883 | Ovary | SVOG3e_cells_Dox_12h_transduced with V5-FOXL2 C134W | 676 | 1 | 501 | 50 | 2 | 0 | 211 | PSG4,PSG5,LOC284344 |
| SE_02_061000148 | chr19:43197095-43208802 |
Sample_02_0610 | Liposarcoma | MLS 1765-92 | 148 | 1 | 736 | 76 | 0 | 0 | 316 | PSG4,PSG5,LOC284344 |
| SE_02_060600438 | chr19:43198105-43205728 |
Sample_02_0606 | Skin | Skin Fibroblast_Nutlin3A | 438 | 1 | 430 | 41 | 0 | 0 | 224 | PSG4,PSG5,LOC284344 |
| SE_02_076700583 | chr19:43198179-43225900 |
Sample_02_0767 | Ovary | OVCA429 | 583 | 12 | 1349 | 184 | 0 | 1 | 599 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_060500546 | chr19:43198208-43204690 |
Sample_02_0605 | Skin | Skin Fibroblast_DMSO | 546 | 1 | 346 | 27 | 0 | 0 | 131 | PSG4,PSG5,LOC284344 |
| SE_02_158401069 | chr19:43198235-43206416 |
Sample_02_1584 | Brain | U87 GBM_Mock | 1069 | 1 | 479 | 53 | 0 | 0 | 240 | PSG4,PSG5,LOC284344 |
| SE_02_048101565 | chr19:43198548-43237606 |
Sample_02_0481 | Mammary gland | MDA-MB231 | 1565 | 10 | 1733 | 230 | 0 | 1 | 659 | PSG4,LOC284344,PSG5,PSG9 |
| SE_02_045100458 | chr19:43198696-43208435 |
Sample_02_0451 | Skin | in vitro transformedskin fibroblasts_tumourigenic | 458 | 1 | 625 | 71 | 0 | 0 | 213 | PSG4,PSG5,LOC284344 |
| SE_02_088101122 | chr19:43198871-43204784 |
Sample_02_0881 | Ovary | SVOG3e cells_Dox_12h_transduced_V5-FOXL2_WT | 1122 | 1 | 304 | 26 | 0 | 0 | 95 | PSG4,PSG5,LOC284344 |
| SE_02_113301058 | chr19:43199636-43205608 |
Sample_02_1133 | Liver | Hepatic stellate cells | 1058 | 1 | 321 | 32 | 0 | 0 | 152 | PSG4,PSG5,LOC284344 |
| SE_02_093800723 | chr19:43199703-43205704 |
Sample_02_0938 | Retinal Pigmented Epithelial | RPE190_TnT | 723 | 1 | 329 | 36 | 0 | 0 | 171 | PSG4,PSG5,LOC284344 |
| SE_02_093900560 | chr19:43199828-43204005 |
Sample_02_0939 | Mammary gland | MDA-MB-231_control | 560 | 1 | 207 | 18 | 0 | 0 | 45 | PSG4,PSG5,LOC284344 |
| SE_02_155100411 | chr19:43218871-43228012 |
Sample_02_1551 | Gastrointestinal Stromal | MaMel | 411 | 1 | 329 | 39 | 0 | 0 | 175 | LOC284344,PSG5,PSG4,PSG9 |
Genomic distribution of SEs associated with PSG4