Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000184005 |
| Gene: | ST6GALNAC3 | Gene type: | protein_coding |
| Strand: | + | External links: |
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| Genomic region: | chr1:76074746-76634603 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_030700005 | chr1:75990568-76110283 |
Sample_02_0307 | Neuroblastoma | SJNB12 | 5 | 17 | 3095 | 389 | 21 | 107 | 128 | ST6GALNAC3 |
| SE_02_150100779 | chr1:76021330-76071630 |
Sample_02_1501 | Brain | SHEP-21N_NOSPIKE | 779 | 13 | 1293 | 196 | 11 | 23 | 0 | LOC101927342,ST6GALNAC3 |
| SE_02_149800639 | chr1:76022644-76071209 |
Sample_02_1498 | Brain | SHEP-21N_DOX_2h | 639 | 9 | 1252 | 189 | 10 | 7 | 0 | LOC101927342,ST6GALNAC3 |
| SE_02_031400413 | chr1:76031131-76083840 |
Sample_02_0314 | Neuroblastoma | SK-N-FI | 413 | 6 | 1332 | 188 | 6 | 40 | 128 | ST6GALNAC3 |
| SE_02_007600583 | chr1:76047790-76090981 |
Sample_02_0076 | Autonomic ganglia | SH-SY5Y_DMSO_3h | 583 | 6 | 1093 | 116 | 4 | 47 | 128 | ST6GALNAC3 |
| SE_02_068500787 | chr1:76057796-76061720 |
Sample_02_0685 | Lung | NCI-H1048_no infection | 787 | 1 | 76 | 11 | 0 | 0 | 0 | LOC101927342,ST6GALNAC3 |
| SE_02_130800904 | chr1:76067794-76077150 |
Sample_02_1308 | Artery | Pulmonary artery endothelial cells_caMEK5 | 904 | 2 | 232 | 17 | 1 | 36 | 128 | ST6GALNAC3 |
| SE_02_155100338 | chr1:76076394-76154824 |
Sample_02_1551 | Gastrointestinal Stromal | MaMel | 338 | 26 | 2046 | 159 | 6 | 85 | 0 | ST6GALNAC3 |
| SE_02_018500902 | chr1:76142217-76155024 |
Sample_02_0185 | Skin | UACC257 | 902 | 4 | 351 | 23 | 3 | 31 | 0 | ST6GALNAC3 |
| SE_02_011700053 | chr1:76154066-76242001 |
Sample_02_0117 | Haematopoietic and lymphoid tissue | KARPAS-422 | 53 | 11 | 2345 | 78 | 8 | 200 | 0 | ST6GALNAC3,MSH4 |
| SE_01_004000065 | chr1:76154179-76250992 |
Sample_01_0040 | Haematopoietic and lymphoid tissue | Karpas-422 | 65 | 11 | 2561 | 82 | 8 | 214 | 0 | ST6GALNAC3 |
| SE_02_078100724 | chr1:76154332-76240881 |
Sample_02_0781 | Lymphoma | Pfeiffer_DMSO | 724 | 26 | 2322 | 78 | 8 | 195 | 0 | ST6GALNAC3,MSH4 |
| SE_02_106500157 | chr1:76154387-76250639 |
Sample_02_1065 | Lymphoma | KARPAS-422_DMSO_8d | 157 | 27 | 2545 | 82 | 8 | 212 | 0 | ST6GALNAC3 |
| SE_02_127100167 | chr1:76212344-76303752 |
Sample_02_1271 | Leiomyosarcoma | SK-LMS-1_WT | 167 | 20 | 2291 | 52 | 7 | 181 | 0 | ST6GALNAC3 |
| SE_02_023200510 | chr1:76218998-76271443 |
Sample_02_0232 | Tonsil | ILC3 | 510 | 11 | 1303 | 27 | 5 | 130 | 0 | ST6GALNAC3 |
| SE_02_101500358 | chr1:76224019-76302971 |
Sample_02_1015 | Embryo | H9_ Undifferentiated | 358 | 16 | 1977 | 44 | 5 | 165 | 0 | ST6GALNAC3 |
| SE_02_101700609 | chr1:76227517-76299497 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 609 | 14 | 1817 | 37 | 5 | 146 | 0 | ST6GALNAC3 |
| SE_02_101600617 | chr1:76227845-76269792 |
Sample_02_1016 | Embryo | H9_Mesendoderm_24h | 617 | 9 | 1043 | 17 | 4 | 107 | 0 | ST6GALNAC3 |
| SE_02_157200734 | chr1:76228389-76250920 |
Sample_02_1572 | iPSCs | FiPSC | 734 | 5 | 537 | 13 | 2 | 50 | 0 | ST6GALNAC3 |
| SE_02_003601436 | chr1:76228705-76251113 |
Sample_02_0036 | Embryo | H7 | 1436 | 4 | 537 | 13 | 2 | 49 | 0 | ST6GALNAC3 |
| SE_02_156700961 | chr1:76228780-76250880 |
Sample_02_1567 | iPSCs | CiPSC | 961 | 4 | 526 | 13 | 2 | 49 | 0 | ST6GALNAC3 |
| SE_02_157000818 | chr1:76228972-76250920 |
Sample_02_1570 | iPSCs | EiPSC | 818 | 5 | 523 | 12 | 2 | 49 | 0 | ST6GALNAC3 |
| SE_02_086000329 | chr1:76229312-76251369 |
Sample_02_0860 | iPSCs | SAH_SMARCB1_K364del/+ | 329 | 8 | 535 | 12 | 2 | 47 | 0 | ST6GALNAC3 |
| SE_02_086100542 | chr1:76229321-76238802 |
Sample_02_0861 | iPSCs | SAH_WT | 542 | 5 | 234 | 6 | 2 | 29 | 0 | ST6GALNAC3 |
| SE_02_127800847 | chr1:76231487-76271842 |
Sample_02_1278 | Chordoma | UCH1_DMSO_48h | 847 | 9 | 1011 | 16 | 4 | 99 | 0 | ST6GALNAC3 |
| SE_02_124100355 | chr1:76236868-76279805 |
Sample_02_1241 | Skin | MCC26_virus_negative | 355 | 14 | 1091 | 23 | 2 | 83 | 0 | ST6GALNAC3 |
| SE_02_141900117 | chr1:76236878-76270441 |
Sample_02_1419 | Brain | hNSC | 117 | 5 | 833 | 11 | 2 | 81 | 0 | ST6GALNAC3 |
| SE_02_155400548 | chr1:76240033-76299678 |
Sample_02_1554 | Gastrointestinal Stromal | GIST-3_KIT e11 | 548 | 19 | 1515 | 28 | 3 | 111 | 0 | ST6GALNAC3 |
| SE_02_139600019 | chr1:76247074-76332209 |
Sample_02_1396 | Colon | COLO320HSR_DMSO | 19 | 12 | 2216 | 34 | 13 | 199 | 56 | ST6GALNAC3 |
| SE_02_013100672 | chr1:76253360-76299778 |
Sample_02_0131 | Lung | 1015_PT | 672 | 11 | 1200 | 24 | 3 | 84 | 0 | ST6GALNAC3 |
| SE_02_023400614 | chr1:76254094-76303134 |
Sample_02_0234 | Tonsil | Th17 | 614 | 9 | 1254 | 25 | 3 | 86 | 0 | ST6GALNAC3 |
| SE_02_150800119 | chr1:76264469-76297399 |
Sample_02_1508 | Brain | NGPz_untreat | 119 | 12 | 848 | 20 | 2 | 29 | 0 | ST6GALNAC3 |
| SE_02_033800158 | chr1:76266095-76297054 |
Sample_02_0338 | Neuroblastoma | BE2 | 158 | 5 | 798 | 19 | 2 | 28 | 0 | ST6GALNAC3 |
| SE_02_023300682 | chr1:76284665-76301747 |
Sample_02_0233 | Tonsil | Th1 | 682 | 4 | 424 | 8 | 0 | 36 | 0 | ST6GALNAC3 |
| SE_02_001800418 | chr1:76293290-76314620 |
Sample_02_0018 | Embryo | NEC | 418 | 5 | 547 | 7 | 2 | 51 | 56 | ST6GALNAC3 |
| SE_02_123600121 | chr1:76328995-76388949 |
Sample_02_1236 | Skin | MKL1_virus_positive | 121 | 19 | 1631 | 25 | 14 | 102 | 0 | ST6GALNAC3 |
| SE_02_123701096 | chr1:76366628-76381691 |
Sample_02_1237 | Skin | MKL2_virus_positive | 1096 | 5 | 409 | 7 | 3 | 42 | 0 | ST6GALNAC3 |
Genomic distribution of SEs associated with ST6GALNAC3