Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000115525
Gene: ST3GAL5 Gene type: protein_coding
Strand: - External links:
Genomic region: chr2:85837120-85905199 Genome Browser:

Super-enhancer search result of gene-based

SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_104900688 chr2:85826447-85893966 Sample_02_1049 Peripheral blood CD4+ cell_ROMI 688 39 1664 235 6 88 1205 ST3GAL5,ST3GAL5-AS1,LOC284950,MIR6071
SE_02_122700042 chr2:85826941-85925578 Sample_02_1227 Bone marrow U266 42 33 2520 390 8 118 1156 ST3GAL5,ST3GAL5-AS1,LOC284950,MIR6071
SE_02_023200187 chr2:85827355-85902710 Sample_02_0232 Tonsil ILC3 187 20 1867 268 6 90 1152 ST3GAL5
SE_02_045600506 chr2:85827595-85866397 Sample_02_0456 Th17 lymphocytes Th17-IL-10- Day 0 506 13 955 122 3 51 637 ST3GAL5,LOC284950,MIR6071,ST3GAL5-AS1
SE_02_045400514 chr2:85827666-85866445 Sample_02_0454 Th17 lymphocytes Th17-IL-10+ Day 0 514 17 951 122 3 51 637 ST3GAL5,LOC284950,MIR6071,ST3GAL5-AS1
SE_02_045500711 chr2:85827683-85863280 Sample_02_0455 Th17 lymphocytes Th17-IL-10+ Day 5 711 8 856 116 2 45 587 ST3GAL5,LOC284950,MIR6071,ST3GAL5-AS1
SE_02_002200550 chr2:85839534-85855568 Sample_02_0022 Blood CD8donorA 550 4 385 49 1 39 474 ST3GAL5
SE_02_010100732 chr2:85843936-85890935 Sample_02_0101 Peripheral blood Macrophages_GM-CSF_72h_IFN-y 732 6 1165 174 6 73 822 ST3GAL5
SE_01_006900168 chr2:85844097-85937671 Sample_01_0069 Adrenal gland adrenal-gland 168 22 2418 388 11 108 988 ST3GAL5
SE_02_023400583 chr2:85846473-85900915 Sample_02_0234 Tonsil Th17 583 10 1366 201 6 65 902 ST3GAL5
SE_01_005400183 chr2:85846563-85867398 Sample_01_0054 Haematopoietic and lymphoid tissue OCI-LY3 183 2 523 67 3 23 378 ST3GAL5
SE_01_008400651 chr2:85846646-85891386 Sample_01_0084 Spleen spleen 651 8 1117 165 6 55 761 ST3GAL5
SE_00_000900317 chr2:85846775-85866269 Sample_00_0009 Blood CD8-positive-alpha-beta-T-cell 317 3 494 66 3 22 360 ST3GAL5
SE_02_002300579 chr2:85847105-85855091 Sample_02_0023 Blood CD8donorC 579 4 201 30 1 11 264 ST3GAL5
SE_02_028400648 chr2:85847777-85894427 Sample_02_0284 Pelvis patient 119 648 7 1163 172 6 55 854 ST3GAL5
SE_02_002400346 chr2:85848507-85863376 Sample_02_0024 Blood CD56+ Natural Killer cells donor A 346 9 382 58 2 8 245 ST3GAL5
SE_01_002000342 chr2:85849425-85867802 Sample_01_0020 Blood B-cell 342 2 486 62 3 14 332 ST3GAL5
SE_00_004400386 chr2:85849459-85863723 Sample_00_0044 Cord blood T-cell 386 2 376 55 2 12 277 ST3GAL5
SE_00_002700384 chr2:85849579-85863733 Sample_00_0027 Blood natural-killer-cell 384 2 373 54 2 12 277 ST3GAL5
SE_02_038700508 chr2:85850384-85865060 Sample_02_0387 Lymph node CD19+_B_cells_nhl_FL1-2 508 8 391 52 2 14 277 ST3GAL5
SE_02_149200657 chr2:85850393-85891765 Sample_02_1492 Peripheral blood CD34+ derived peripheral blood-derived mast cells 657 6 1045 154 6 46 704 ST3GAL5,ST3GAL5-AS1,LOC284950
SE_02_087500753 chr2:85850424-85891698 Sample_02_0875 Peripheral blood Peripheral blood-derived mast cells 753 13 1043 152 6 46 698 ST3GAL5,ST3GAL5-AS1,LOC284950
SE_00_000500225 chr2:85850866-85863778 Sample_00_0005 Blood B-cell 225 2 335 45 2 10 277 ST3GAL5
SE_02_157300501 chr2:85850958-85891343 Sample_02_1573 Endothelial Undifferentiated Pleomorphic Sarcoma 501 10 1019 149 6 44 659 ST3GAL5,ST3GAL5-AS1,LOC284950
SE_02_073600465 chr2:85850988-85863529 Sample_02_0736 Blood Pt24_leukemia cell_THZ1 465 6 323 45 2 10 264 ST3GAL5,LOC284950,ST3GAL5-AS1
SE_02_002500392 chr2:85851137-85863130 Sample_02_0025 Blood CD19donorA 392 3 309 45 2 6 210 ST3GAL5
SE_02_123900256 chr2:85851320-85894176 Sample_02_1239 Skin Waga_virus_positive 256 9 1075 157 6 49 754 ST3GAL5,ST3GAL5-AS1,LOC284950
SE_02_156400051 chr2:85851392-85894195 Sample_02_1564 Gastrointestinal Stromal GIST-430 51 17 1069 156 6 49 750 ST3GAL5,ST3GAL5-AS1,LOC284950
SE_02_123700725 chr2:85865571-85894149 Sample_02_1237 Skin MKL2_virus_positive 725 6 698 107 3 37 515 ST3GAL5,ST3GAL5-AS1
SE_02_108200966 chr2:85869519-85893869 Sample_02_1082 Retina retina 966 8 589 95 2 36 451 ST3GAL5-AS1,ST3GAL5
SE_02_030101125 chr2:85875238-85912995 Sample_02_0301 Neuroblastoma GIMEN 1125 5 955 163 3 50 451 ST3GAL5
SE_01_008700069 chr2:85876607-85957809 Sample_01_0087 Thyroid gland thyroid-gland 69 12 2204 368 16 90 451 ST3GAL5
SE_02_035000108 chr2:85878747-85927480 Sample_02_0350 Dorsolateral prefrontal cortex dorsolateral-prefrontal-cortex 108 15 1302 220 3 60 451 ST3GAL5
SE_02_154900750 chr2:85878910-85893961 Sample_02_1549 Gastrointestinal Stromal GIST-430B 750 6 361 53 0 28 451 ST3GAL5-AS1,ST3GAL5
SE_02_037600327 chr2:85883529-85894145 Sample_02_0376 Skeletal muscle RMS237 327 2 247 34 0 29 451 ST3GAL5
SE_01_008801184 chr2:85884271-85931072 Sample_01_0088 Tibial nerve tibial-nerve 1184 7 1253 217 4 59 451 ST3GAL5
SE_02_035900899 chr2:85884689-85895427 Sample_02_0359 Colon Colo741 899 2 246 35 0 29 451 ST3GAL5
SE_02_039601803 chr2:85885085-85914034 Sample_02_0396 Skin NHEK-D 1803 8 773 133 1 40 451 ST3GAL5
SE_03_000800161 chr2:85885772-85941356 Sample_03_0008 Lung A549_dexamethasone_7h 161 5 1477 245 7 54 451 ST3GAL5
SE_02_018400132 chr2:85885829-85936659 Sample_02_0184 Skin SKMEL30 132 10 1331 227 5 52 451 ST3GAL5
SE_02_006800386 chr2:85885907-85937721 Sample_02_0068 Skin A375_DMSO 386 9 1366 229 5 52 451 ST3GAL5
SE_02_018500109 chr2:85885926-85937167 Sample_02_0185 Skin UACC257 109 10 1349 229 5 52 451 ST3GAL5
SE_03_000300123 chr2:85886051-85931286 Sample_03_0003 Foreskin foreskin-keratinocyte-calcium5.5day 123 6 1206 209 4 52 451 ST3GAL5
SE_02_042300255 chr2:85886067-85937993 Sample_02_0423 Skin A375 255 17 1367 229 5 53 451 ST3GAL5
SE_02_040600152 chr2:85886186-85937354 Sample_02_0406 Mammary gland ZR-75-30_parental 152 9 1349 228 5 52 451 ST3GAL5
SE_02_040500148 chr2:85886252-85937658 Sample_02_0405 Mammary gland ZR-75-30_KO 148 7 1357 228 5 52 451 ST3GAL5
SE_02_018300150 chr2:85886332-85937613 Sample_02_0183 Skin SKMEL2 150 15 1355 228 5 52 451 ST3GAL5
SE_02_018000238 chr2:85886691-85937821 Sample_02_0180 melanoma CJM 238 11 1349 226 5 53 451 ST3GAL5
SE_01_004500997 chr2:85892433-85914861 Sample_01_0045 Mammary gland mammary-epithelial-cell 997 3 621 111 1 18 0 ST3GAL5
SE_02_036400389 chr2:85910501-85962242 Sample_02_0364 Skeletal muscle CTR 389 6 1500 234 13 44 0 ST3GAL5
SE_03_001500283 chr2:85910595-85940716 Sample_03_0015 Lung A549_dexamethasone_8h 283 5 820 132 6 22 0 ST3GAL5
SE_03_000700292 chr2:85910656-85940671 Sample_03_0007 Lung A549_dexamethasone_12h 292 4 816 131 6 22 0 ST3GAL5
SE_01_000600520 chr2:85911494-85964971 Sample_01_0006 Lung A549_ethanol_1h 520 7 1580 245 13 41 0 ST3GAL5
SE_03_000900360 chr2:85911632-85940585 Sample_03_0009 Lung A549_dexamethasone_3h 360 2 780 127 6 19 0 ST3GAL5
SE_03_001000351 chr2:85911651-85964172 Sample_03_0010 Lung A549_dexamethasone_1h 351 7 1539 239 13 41 0 ST3GAL5
SE_03_000400317 chr2:85911652-85940110 Sample_03_0004 Lung A549_dexamethasone_4h 317 3 767 122 5 19 0 ST3GAL5
SE_03_000500363 chr2:85911679-85964142 Sample_03_0005 Lung A549_dexamethasone_0.5h 363 8 1533 239 13 41 0 ST3GAL5
SE_02_029500410 chr2:85911782-85937925 Sample_02_0295 Lung A549_TGFBeta_72h 410 4 702 117 4 18 0 ST3GAL5
SE_02_004800504 chr2:85911907-85937702 Sample_02_0048 Embryo endodermal CyT49_HE 504 7 693 117 4 17 0 ST3GAL5
SE_02_004001077 chr2:85911995-85937369 Sample_02_0040 Embryo PFG 1077 4 680 114 4 17 0 ST3GAL5
SE_03_001300382 chr2:85913665-85964207 Sample_03_0013 Lung A549 382 6 1475 225 13 41 0 ST3GAL5
SE_02_004900303 chr2:85917997-85925501 Sample_02_0049 Embryo endodermal CyT49_GTtoH 303 1 202 28 1 14 0 ST3GAL5
SE_02_004500615 chr2:85919605-85936825 Sample_02_0045 Embryo endodermal CyT49_ES_D7 615 3 447 71 3 13 0 ST3GAL5
SE_03_001600277 chr2:85919688-85940986 Sample_03_0016 Lung A549_dexamethasone_6h 277 1 565 85 5 15 0 ST3GAL5
SE_03_001100208 chr2:85919943-85940264 Sample_03_0011 Lung A549_dexamethasone_5h 208 2 529 75 4 15 0 ST3GAL5
SE_03_001400494 chr2:85920305-85940372 Sample_03_0014 Lung A549_dexamethasone_2h 494 3 530 76 4 15 0 ST3GAL5
SE_02_003800898 chr2:85920714-85937271 Sample_02_0038 Embryo DE 898 5 437 68 3 13 0 ST3GAL5
SE_02_004300851 chr2:85920718-85937168 Sample_02_0043 Embryo endodermal CyT49_ES_D2 851 4 435 68 3 13 0 ST3GAL5
SE_02_003000489 chr2:85923284-85938593 Sample_02_0030 Kidney human kidney proximal tubule cells 489 5 409 63 4 8 0 ST3GAL5
SE_02_037200411 chr2:85923711-85929992 Sample_02_0372 Skeletal muscle RMS008 411 1 197 31 2 7 0 ST3GAL5

Genomic distribution of SEs associated with ST3GAL5

The strength of the tissue affected by the gene


Expression of ST3GAL5