SEdb 2.0
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Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000183638
Gene: RP1L1 Gene type: protein_coding
Strand: - External links:
Genomic region: chr8:10606349-10712187 Genome Browser:

Super-enhancer search result of gene-based

GREAT Download bed
SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_111900482 chr8:10622065-10639643 Sample_02_1119 Blood KBM7 482 9 775 54 1 38 186 RP1L1,C8ORF74,MIR4286
SE_02_108300180 chr8:10624206-10661853 Sample_02_1083 Macula macula 180 2 1553 98 1 77 137 RP1L1,C8ORF74,MIR4286
SE_02_088500454 chr8:10624530-10641125 Sample_02_0885 Blood NALM6_2 454 2 679 52 1 38 0 RP1L1,C8ORF74,MIR4286
SE_02_152000272 chr8:10624632-10637318 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 272 9 533 39 1 30 0 RP1L1,C8ORF74,MIR4286,C8orf74
SE_02_151900515 chr8:10624729-10637318 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 515 12 528 39 1 30 0 RP1L1,C8ORF74,MIR4286,C8orf74
SE_02_095001320 chr8:10624837-10653123 Sample_02_0950 Umbilical vein HUVEC_WT 1320 13 1149 71 1 53 0 RP1L1,C8ORF74,MIR4286,C8orf74
SE_02_083100616 chr8:10624865-10637520 Sample_02_0831 Umblical vein HUVECs_TNF0min 616 10 531 39 0 30 0 RP1L1,C8ORF74,MIR4286,C8orf74
SE_02_083200488 chr8:10624993-10637316 Sample_02_0832 Umblical vein HUVECs_TNF30min 488 10 517 37 0 30 0 RP1L1,C8ORF74,MIR4286,C8orf74
SE_02_151800607 chr8:10625584-10637309 Sample_02_1518 Umbilical vein HUVEC_Scr 607 9 486 35 0 30 0 RP1L1,C8ORF74,MIR4286,C8orf74
SE_02_057300778 chr8:10625704-10639670 Sample_02_0573 Blood Nalm6_1 778 8 571 44 0 38 0 RP1L1,C8ORF74,MIR4286
SE_02_108200619 chr8:10626019-10661593 Sample_02_1082 Retina retina 619 19 1447 89 0 77 137 RP1L1,C8ORF74,MIR4286
SE_02_153900870 chr8:10629824-10661660 Sample_02_1539 Nasopharyngeal C666-1 870 9 1293 78 0 70 137 RP1L1,C8ORF74,MIR4286
SE_02_098800421 chr8:10629877-10660839 Sample_02_0988 Blood K562_EPZ 421 10 1252 73 0 70 137 RP1L1,C8ORF74,MIR4286,SOX7,C8orf74
SE_02_007200140 chr8:10648981-10657679 Sample_02_0072 Lung NCI-H82_DMSO 140 3 348 11 0 30 137 RP1L1,C8ORF74
Genomic distribution of SEs associated with RP1L1
Genome Browser

The strength of the tissue affected by the gene

Expression of RP1L1

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)