Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000055917 |
| Gene: | PUM2 | Gene type: | protein_coding |
| Strand: | - | External links: |
|
| Genomic region: | chr2:20248691-20352234 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_023400566 | chr2:20270141-20366347 |
Sample_02_0234 | Tonsil | Th17 | 566 | 25 | 2581 | 118 | 2 | 307 | 693 | PUM2,SDC1 |
| SE_02_045100899 | chr2:20288025-20325356 |
Sample_02_0451 | Skin | in vitro transformedskin fibroblasts_tumourigenic | 899 | 12 | 1028 | 49 | 0 | 103 | 310 | PUM2 |
| SE_02_137801260 | chr2:20288232-20337520 |
Sample_02_1378 | Pancreas | Pancreatic_tumor_associated_fibroblasts_CAF08_untreated | 1260 | 18 | 1362 | 59 | 0 | 130 | 382 | PUM2 |
| SE_02_104901323 | chr2:20292094-20355875 |
Sample_02_1049 | Peripheral blood | CD4+ cell_ROMI | 1323 | 26 | 1771 | 76 | 1 | 200 | 540 | PUM2 |
| SE_02_149301052 | chr2:20298930-20311429 |
Sample_02_1493 | Skin | SK-MEL-5_DMSO_6h | 1052 | 7 | 345 | 18 | 0 | 33 | 79 | PUM2 |
| SE_02_104301384 | chr2:20319976-20356839 |
Sample_02_1043 | Peripheral blood | Peripheral blood cells_CTCL1200 | 1384 | 16 | 1007 | 43 | 1 | 118 | 262 | PUM2 |
| SE_02_152400676 | chr2:20321436-20347657 |
Sample_02_1524 | Lung | H3122 DMSO | 676 | 6 | 749 | 31 | 0 | 47 | 72 | PUM2 |
| SE_02_023300751 | chr2:20323767-20366174 |
Sample_02_0233 | Tonsil | Th1 | 751 | 10 | 1140 | 44 | 1 | 128 | 262 | PUM2 |
| SE_02_055500909 | chr2:20334677-20354356 |
Sample_02_0555 | Other | HAP1_WT | 909 | 5 | 536 | 25 | 1 | 72 | 190 | PUM2 |
| SE_02_092900675 | chr2:20334984-20375007 |
Sample_02_0929 | Mid-gestation placenta | trophoblast__CytT | 675 | 10 | 1060 | 44 | 2 | 89 | 190 | PUM2 |
| SE_02_101701256 | chr2:20335007-20356804 |
Sample_02_1017 | Embryo | H9_Mesendoderm 24h_Hydroxyurea | 1256 | 4 | 575 | 28 | 1 | 75 | 190 | PUM2 |
| SE_01_009500735 | chr2:20335442-20354273 |
Sample_01_0095 | Embryo | neuroepithelial stem cell stably expressing HES5 originated from H9 | 735 | 3 | 505 | 25 | 1 | 72 | 190 | PUM2 |
| SE_02_106000619 | chr2:20339120-20354937 |
Sample_02_1060 | Bone | TC71_SA2 KO | 619 | 5 | 434 | 21 | 1 | 75 | 190 | PUM2 |
| SE_02_074600833 | chr2:20340781-20353530 |
Sample_02_0746 | Embryo | ES derived primitive cardiomyocite_day15 | 833 | 3 | 349 | 18 | 1 | 55 | 150 | PUM2 |
| SE_02_077502010 | chr2:20344660-20355800 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 2010 | 3 | 289 | 12 | 1 | 75 | 190 | PUM2 |
| SE_02_139200527 | chr2:20345692-20372646 |
Sample_02_1392 | Peripheral blood | Mac-2A_ALK- | 527 | 9 | 694 | 28 | 2 | 89 | 190 | PUM2 |
| SE_02_036500140 | chr2:20347460-20354461 |
Sample_02_0365 | Skeletal muscle | NCI0075 | 140 | 2 | 178 | 9 | 1 | 69 | 190 | PUM2 |
| SE_02_045500668 | chr2:20348407-20369862 |
Sample_02_0455 | Th17 lymphocytes | Th17-IL-10+ Day 5 | 668 | 9 | 553 | 19 | 1 | 85 | 190 | PUM2 |
| SE_02_130500510 | chr2:20348696-20356816 |
Sample_02_1305 | Pancreas | Gemcitabine resistant L3.6pl | 510 | 2 | 196 | 9 | 1 | 70 | 190 | PUM2 |
| SE_02_004000842 | chr2:20349056-20353330 |
Sample_02_0040 | Embryo | PFG | 842 | 1 | 100 | 6 | 1 | 48 | 145 | PUM2 |
| SE_02_003900342 | chr2:20349194-20354398 |
Sample_02_0039 | Embryo | AFG | 342 | 1 | 130 | 6 | 1 | 66 | 190 | PUM2 |
| SE_02_004900331 | chr2:20349257-20354274 |
Sample_02_0049 | Embryo endodermal | CyT49_GTtoH | 331 | 1 | 124 | 6 | 1 | 66 | 190 | PUM2 |
| SE_02_001400390 | chr2:20349475-20352192 |
Sample_02_0014 | Liver | HepG2_shBRG1 | 390 | 1 | 60 | 5 | 0 | 43 | 145 | PUM2 |
| SE_02_033000417 | chr2:20349512-20354402 |
Sample_02_0330 | Endoderm | MHG | 417 | 1 | 123 | 6 | 1 | 64 | 190 | PUM2 |
| SE_02_003801693 | chr2:20349531-20353366 |
Sample_02_0038 | Embryo | DE | 1693 | 1 | 91 | 6 | 1 | 45 | 145 | PUM2 |
| SE_03_000300434 | chr2:20349533-20370729 |
Sample_03_0003 | Foreskin | foreskin-keratinocyte-calcium5.5day | 434 | 4 | 541 | 18 | 1 | 81 | 190 | PUM2 |
| SE_02_007500337 | chr2:20349550-20353371 |
Sample_02_0075 | Autonomic ganglia | kelly_DMSO_3h | 337 | 1 | 91 | 6 | 1 | 45 | 145 | PUM2 |
| SE_02_074500549 | chr2:20349667-20353685 |
Sample_02_0745 | Embryo | ES derived cardiac progenitor cells_day7 | 549 | 2 | 102 | 6 | 1 | 54 | 164 | PUM2 |
| SE_02_004800502 | chr2:20349697-20353355 |
Sample_02_0048 | Embryo endodermal | CyT49_HE | 502 | 1 | 89 | 5 | 1 | 44 | 145 | PUM2 |
| SE_02_039601747 | chr2:20349842-20375678 |
Sample_02_0396 | Skin | NHEK-D | 1747 | 7 | 678 | 26 | 2 | 80 | 190 | PUM2,RHOB |
| SE_02_004600316 | chr2:20349941-20352968 |
Sample_02_0046 | Embryo endodermal | CyT49_ES_D10 | 316 | 2 | 72 | 5 | 1 | 44 | 145 | PUM2,RHOB |
| SE_02_004500265 | chr2:20349987-20354384 |
Sample_02_0045 | Embryo endodermal | CyT49_ES_D7 | 265 | 3 | 116 | 5 | 1 | 63 | 190 | PUM2,RHOB |
| SE_02_004400303 | chr2:20350015-20354414 |
Sample_02_0044 | Embryo endodermal | CyT49_ES_D5 | 303 | 2 | 115 | 5 | 1 | 63 | 190 | PUM2,RHOB |
Genomic distribution of SEs associated with PUM2