Gene overview
| Strategies/Algorithm: | closest | Ensembl ID: | ENSG00000235123 |
| Gene: | DSCAM-AS1 | Gene type: | lncRNA |
| Strand: | + | External links: |
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| Genomic region: | chr21:40383083-40385358 | Genome Browser: |   |
Super-enhancer search result of gene-based
| SE ID | SE Region | Sample ID | Tissue type | Biosample name | SE rank | Element | Common SNP | eQTL | Risk SNP | TFBS | CRISPR Cas9 | Gene |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SE_02_052700005 | chr21:40308290-40418160 |
Sample_02_0527 | Mammary gland | MCF7_WT | 5 | 35 | 3305 | 13 | 23 | 68 | 682 | DSCAM-AS1,DSCAM |
| SE_02_108800041 | chr21:40309121-40351716 |
Sample_02_1088 | Mammary gland | T47D_shCtrl_45min | 41 | 13 | 1255 | 4 | 5 | 21 | 299 | DSCAM,DSCAM-AS1 |
| SE_02_109200052 | chr21:40309740-40351762 |
Sample_02_1092 | Mammary gland | T47D_shCtrl_24hr | 52 | 11 | 1233 | 4 | 5 | 21 | 299 | DSCAM,DSCAM-AS1 |
| SE_02_109300038 | chr21:40309995-40351818 |
Sample_02_1093 | Mammary gland | T47D_shCtrl_shRING1B_24hr | 38 | 7 | 1226 | 4 | 5 | 21 | 299 | DSCAM,DSCAM-AS1 |
| SE_02_108900063 | chr21:40309999-40351684 |
Sample_02_1089 | Mammary gland | T47D_shCtrl_shRING1B_45min | 63 | 11 | 1222 | 4 | 5 | 21 | 299 | DSCAM,DSCAM-AS1 |
| SE_02_062700020 | chr21:40310290-40345669 |
Sample_02_0627 | Mammary gland | WS8_VEH | 20 | 6 | 1045 | 4 | 5 | 21 | 226 | DSCAM,DSCAM-AS1 |
| SE_02_062600011 | chr21:40310329-40345924 |
Sample_02_0626 | Mammary gland | WS8_E2 | 11 | 4 | 1054 | 4 | 5 | 21 | 226 | DSCAM,DSCAM-AS1 |
| SE_02_146500130 | chr21:40310577-40346667 |
Sample_02_1465 | Ovary | CAOV4cis | 130 | 13 | 1074 | 4 | 5 | 21 | 226 | DSCAM,DSCAM-AS1 |
| SE_02_053200030 | chr21:40310594-40352324 |
Sample_02_0532 | Mammary gland | T47D | 30 | 15 | 1222 | 4 | 5 | 21 | 299 | DSCAM,DSCAM-AS1 |
| SE_02_109000048 | chr21:40310683-40351663 |
Sample_02_1090 | Mammary gland | T47D_shCtrl_8hr | 48 | 8 | 1195 | 4 | 5 | 21 | 299 | DSCAM,DSCAM-AS1 |
| SE_02_157500026 | chr21:40312682-40344219 |
Sample_02_1575 | Mammary gland | MCF7_Mock | 26 | 7 | 934 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_01_011300010 | chr21:40312694-40346196 |
Sample_01_0113 | Mammary gland | MCF-7 | 10 | 20 | 985 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_056800035 | chr21:40312761-40347241 |
Sample_02_0568 | Mammary gland | MCF7L_E2_4h | 35 | 12 | 1018 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_056300111 | chr21:40312783-40344271 |
Sample_02_0563 | Mammary gland | MCF7L-P_0h | 111 | 10 | 933 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_056500097 | chr21:40312859-40344156 |
Sample_02_0565 | Mammary gland | MCF7L-P_E2_16h | 97 | 16 | 929 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_085200165 | chr21:40312863-40347206 |
Sample_02_0852 | Mammary gland | MCF7L-P | 165 | 7 | 1015 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_115900165 | chr21:40312863-40347230 |
Sample_02_1159 | Mammary gland | MCF7 | 165 | 7 | 1016 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_052600008 | chr21:40312914-40346023 |
Sample_02_0526 | Mammary gland | MCF7 TRPS1 KO | 8 | 6 | 977 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_056400053 | chr21:40312950-40344225 |
Sample_02_0564 | Mammary gland | MCF7L-P_E2_1h | 53 | 13 | 927 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_062500030 | chr21:40313165-40345508 |
Sample_02_0625 | Mammary gland | WS8_4OHT | 30 | 4 | 949 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_123400041 | chr21:40313226-40351974 |
Sample_02_1234 | Mammary gland | T47D_Full | 41 | 19 | 1119 | 4 | 5 | 4 | 225 | DSCAM,DSCAM-AS1 |
| SE_02_146400089 | chr21:40313290-40346902 |
Sample_02_1464 | Ovary | CAOV4 | 89 | 12 | 988 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_056600081 | chr21:40313300-40344219 |
Sample_02_0566 | Mammary gland | MCF7L-P_E2_24h | 81 | 14 | 911 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_157800119 | chr21:40313344-40343451 |
Sample_02_1578 | Mammary gland | MCF7_DAC+455 | 119 | 14 | 887 | 4 | 4 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_066700034 | chr21:40313387-40342133 |
Sample_02_0667 | Mammary gland | MCF7_FA | 34 | 7 | 852 | 2 | 4 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_085000032 | chr21:40313448-40345293 |
Sample_02_0850 | Mammary gland | MCF7L-P_FOXA1-Dox | 32 | 4 | 930 | 4 | 5 | 4 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_157600023 | chr21:40313666-40343540 |
Sample_02_1576 | Mammary gland | MCF7_CPI-455 | 23 | 11 | 880 | 4 | 3 | 3 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_108700151 | chr21:40314003-40351687 |
Sample_02_1087 | Mammary gland | T47D_shCtrl_shRING1B_0 | 151 | 13 | 1082 | 4 | 4 | 3 | 225 | DSCAM,DSCAM-AS1 |
| SE_02_108600222 | chr21:40314146-40351675 |
Sample_02_1086 | Mammary gland | T47D_shCtrl_0hr | 222 | 20 | 1079 | 4 | 4 | 3 | 225 | DSCAM,DSCAM-AS1 |
| SE_02_109100057 | chr21:40314473-40351728 |
Sample_02_1091 | Mammary gland | T47D_shCtrl_shRING1B_8hr | 57 | 17 | 1073 | 4 | 4 | 3 | 225 | DSCAM,DSCAM-AS1 |
| SE_02_080900440 | chr21:40314511-40352192 |
Sample_02_0809 | Mammary gland | T47D Serum | 440 | 13 | 1086 | 4 | 4 | 3 | 225 | DSCAM,DSCAM-AS1 |
| SE_02_157700137 | chr21:40314656-40342092 |
Sample_02_1577 | Mammary gland | MCF7_DAC | 137 | 18 | 817 | 2 | 3 | 3 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_062300092 | chr21:40314698-40345652 |
Sample_02_0623 | Mammary gland | TAMR_E2 | 92 | 8 | 906 | 4 | 4 | 3 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_115800015 | chr21:40314957-40397567 |
Sample_02_1158 | Mammary gland | MCF7_siYTHDC1_E2 | 15 | 17 | 2500 | 8 | 22 | 46 | 608 | DSCAM-AS1,DSCAM |
| SE_02_049600191 | chr21:40317517-40341113 |
Sample_02_0496 | Mammary gland | C49R | 191 | 13 | 700 | 1 | 2 | 0 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_107700161 | chr21:40318124-40343613 |
Sample_02_1077 | Mammary gland | MCF7_TET2KO-E2 | 161 | 9 | 751 | 3 | 2 | 0 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_077800102 | chr21:40318591-40341926 |
Sample_02_0778 | Mammary gland | MCF7_FASR | 102 | 8 | 697 | 1 | 2 | 0 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_085100059 | chr21:40318594-40388366 |
Sample_02_0851 | Mammary gland | MCF7L-P_FOXA1+Dox | 59 | 24 | 2109 | 6 | 17 | 32 | 608 | DSCAM-AS1,DSCAM |
| SE_02_084500040 | chr21:40318809-40338939 |
Sample_02_0845 | Mammary gland | MCF-7_DMSO_sgARID1A-2_KO | 40 | 9 | 595 | 1 | 2 | 0 | 64 | DSCAM,DSCAM-AS1 |
| SE_02_062400128 | chr21:40319655-40345337 |
Sample_02_0624 | Mammary gland | TAMR_VEH | 128 | 7 | 749 | 3 | 3 | 0 | 152 | DSCAM,DSCAM-AS1 |
| SE_02_062400041 | chr21:40366412-40388595 |
Sample_02_0624 | Mammary gland | TAMR_VEH | 41 | 3 | 680 | 1 | 10 | 32 | 307 | DSCAM-AS1,DSCAM |
| SE_02_062300039 | chr21:40366641-40388859 |
Sample_02_0623 | Mammary gland | TAMR_E2 | 39 | 4 | 684 | 0 | 10 | 32 | 307 | DSCAM-AS1,DSCAM |
| SE_02_157500080 | chr21:40366644-40390199 |
Sample_02_1575 | Mammary gland | MCF7_Mock | 80 | 13 | 721 | 0 | 10 | 40 | 307 | DSCAM-AS1,DSCAM |
| SE_02_157700180 | chr21:40366761-40389094 |
Sample_02_1577 | Mammary gland | MCF7_DAC | 180 | 9 | 686 | 0 | 9 | 32 | 307 | DSCAM-AS1,DSCAM |
| SE_02_052600018 | chr21:40366766-40417218 |
Sample_02_0526 | Mammary gland | MCF7 TRPS1 KO | 18 | 20 | 1510 | 5 | 13 | 46 | 307 | DSCAM-AS1,DSCAM |
| SE_02_107600190 | chr21:40366784-40387768 |
Sample_02_1076 | Mammary gland | MCF7_TET2WT-E2 | 190 | 8 | 645 | 0 | 8 | 32 | 307 | DSCAM-AS1,DSCAM |
| SE_02_157800200 | chr21:40366798-40390019 |
Sample_02_1578 | Mammary gland | MCF7_DAC+455 | 200 | 9 | 712 | 0 | 9 | 40 | 307 | DSCAM-AS1,DSCAM |
| SE_02_107700172 | chr21:40367049-40387683 |
Sample_02_1077 | Mammary gland | MCF7_TET2KO-E2 | 172 | 5 | 632 | 0 | 7 | 32 | 307 | DSCAM-AS1,DSCAM |
| SE_01_011300046 | chr21:40367075-40389163 |
Sample_01_0113 | Mammary gland | MCF-7 | 46 | 13 | 677 | 0 | 9 | 32 | 307 | DSCAM-AS1,DSCAM |
| SE_02_157600079 | chr21:40367208-40389153 |
Sample_02_1576 | Mammary gland | MCF7_CPI-455 | 79 | 8 | 672 | 0 | 9 | 32 | 307 | DSCAM-AS1,DSCAM |
| SE_02_077800007 | chr21:40367638-40405084 |
Sample_02_0778 | Mammary gland | MCF7_FASR | 7 | 8 | 1132 | 1 | 13 | 46 | 307 | DSCAM-AS1,DSCAM |
| SE_02_085200544 | chr21:40373158-40390162 |
Sample_02_0852 | Mammary gland | MCF7L-P | 544 | 7 | 521 | 0 | 5 | 20 | 269 | DSCAM-AS1,DSCAM |
| SE_02_115900545 | chr21:40373158-40390162 |
Sample_02_1159 | Mammary gland | MCF7 | 545 | 7 | 521 | 0 | 5 | 20 | 269 | DSCAM-AS1,DSCAM |
| SE_02_066700027 | chr21:40373255-40388994 |
Sample_02_0667 | Mammary gland | MCF7_FA | 27 | 5 | 479 | 0 | 5 | 12 | 269 | DSCAM-AS1,DSCAM |
| SE_02_062700039 | chr21:40373585-40389193 |
Sample_02_0627 | Mammary gland | WS8_VEH | 39 | 3 | 481 | 0 | 5 | 12 | 269 | DSCAM-AS1,DSCAM |
| SE_02_062500041 | chr21:40374234-40389023 |
Sample_02_0625 | Mammary gland | WS8_4OHT | 41 | 3 | 459 | 0 | 5 | 12 | 269 | DSCAM-AS1,DSCAM |
| SE_02_056600160 | chr21:40374606-40388595 |
Sample_02_0566 | Mammary gland | MCF7L-P_E2_24h | 160 | 4 | 432 | 0 | 5 | 12 | 269 | DSCAM-AS1,DSCAM |
| SE_02_056300203 | chr21:40374650-40388792 |
Sample_02_0563 | Mammary gland | MCF7L-P_0h | 203 | 6 | 440 | 0 | 5 | 12 | 269 | DSCAM-AS1,DSCAM |
| SE_02_056800075 | chr21:40374665-40388950 |
Sample_02_0568 | Mammary gland | MCF7L_E2_4h | 75 | 2 | 442 | 0 | 5 | 12 | 269 | DSCAM-AS1,DSCAM |
| SE_02_062600037 | chr21:40374668-40390280 |
Sample_02_0626 | Mammary gland | WS8_E2 | 37 | 5 | 479 | 0 | 5 | 20 | 269 | DSCAM-AS1,DSCAM |
| SE_02_056400120 | chr21:40377374-40387722 |
Sample_02_0564 | Mammary gland | MCF7L-P_E2_1h | 120 | 3 | 326 | 0 | 2 | 10 | 269 | DSCAM-AS1,DSCAM |
| SE_02_053200143 | chr21:40378996-40388951 |
Sample_02_0532 | Mammary gland | T47D | 143 | 4 | 322 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_109300171 | chr21:40379169-40388749 |
Sample_02_1093 | Mammary gland | T47D_shCtrl_shRING1B_24hr | 171 | 1 | 317 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_123400259 | chr21:40379224-40388918 |
Sample_02_1234 | Mammary gland | T47D_Full | 259 | 5 | 320 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_109200193 | chr21:40379371-40388913 |
Sample_02_1092 | Mammary gland | T47D_shCtrl_24hr | 193 | 1 | 317 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_108700242 | chr21:40379372-40388534 |
Sample_02_1087 | Mammary gland | T47D_shCtrl_shRING1B_0 | 242 | 1 | 305 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_108800142 | chr21:40379395-40388793 |
Sample_02_1088 | Mammary gland | T47D_shCtrl_45min | 142 | 1 | 314 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_109000105 | chr21:40379522-40388867 |
Sample_02_1090 | Mammary gland | T47D_shCtrl_8hr | 105 | 2 | 311 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_108600298 | chr21:40379526-40388554 |
Sample_02_1086 | Mammary gland | T47D_shCtrl_0hr | 298 | 2 | 300 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_108900172 | chr21:40379539-40388625 |
Sample_02_1089 | Mammary gland | T47D_shCtrl_shRING1B_45min | 172 | 2 | 300 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_109100114 | chr21:40379665-40388651 |
Sample_02_1091 | Mammary gland | T47D_shCtrl_shRING1B_8hr | 114 | 3 | 295 | 0 | 3 | 9 | 269 | DSCAM-AS1,DSCAM |
| SE_02_049600157 | chr21:40380634-40386609 |
Sample_02_0496 | Mammary gland | C49R | 157 | 3 | 206 | 0 | 0 | 0 | 269 | DSCAM-AS1,DSCAM |
| SE_02_084500022 | chr21:40380713-40387329 |
Sample_02_0845 | Mammary gland | MCF-7_DMSO_sgARID1A-2_KO | 22 | 3 | 223 | 0 | 0 | 0 | 269 | DSCAM-AS1,DSCAM |
| SE_02_077501655 | chr21:40401881-40406968 |
Sample_02_0775 | Pancreas | EndoC-BH1_SE | 1655 | 2 | 162 | 0 | 0 | 0 | 0 | DSCAM,DSCAM-AS1 |
Genomic distribution of SEs associated with DSCAM-AS1