SEdb 2.0
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  2. Super-enhancer search result of gene-based

Gene overview

Strategies/Algorithm: closest Ensembl ID: ENSG00000106665
Gene: CLIP2 Gene type: protein_coding
Strand: + External links:
Genomic region: chr7:74289407-74405935 Genome Browser:

Super-enhancer search result of gene-based

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SE ID SE Region Sample ID Tissue type Biosample name SE rank Element Common SNP eQTL Risk SNP TFBS CRISPR Cas9 Gene
SE_02_103500094 chr7:74239341-74402256 Sample_02_1035 Mammary gland HCC70_Vehicle 94 77 4435 296 3 233 2695 CLIP2,RFC2,LAT2,MIR590
SE_02_118500281 chr7:74241539-74308175 Sample_02_1185 Brain GBM14 281 10 1839 133 1 73 654 CLIP2,RFC2,LAT2
SE_02_118600372 chr7:74241559-74308851 Sample_02_1186 Brain GBM15 372 10 1854 134 1 73 654 CLIP2,RFC2,LAT2
SE_02_095300030 chr7:74241578-74380859 Sample_02_0953 Brain H3.3K27M_1840 30 40 3792 268 3 193 2001 CLIP2,RFC2,LAT2
SE_02_077500263 chr7:74245814-74311242 Sample_02_0775 Pancreas EndoC-BH1_SE 263 26 1824 130 2 69 591 CLIP2,RFC2,LAT2
SE_02_082600125 chr7:74249698-74316322 Sample_02_0826 Stomach gastric tumor 125 37 1836 128 2 67 443 CLIP2,RFC2,LAT2
SE_02_144500338 chr7:74252207-74292708 Sample_02_1445 Adipose SW872_TAZ4SA 338 8 1105 84 1 55 407 CLIP2,RFC2,LAT2
SE_02_032400149 chr7:74252348-74295879 Sample_02_0324 Colon SW48 149 4 1200 93 1 55 381 RFC2,CLIP2,LAT2
SE_02_017900178 chr7:74252487-74315440 Sample_02_0179 Urinary bladder T24 178 9 1734 121 2 66 368 RFC2,CLIP2,LAT2
SE_02_117700085 chr7:74252914-74328340 Sample_02_1177 Brain GBM05 85 21 2059 137 2 81 480 CLIP2,RFC2,LAT2
SE_02_048100330 chr7:74253099-74315070 Sample_02_0481 Mammary gland MDA-MB231 330 28 1706 119 2 66 351 CLIP2,RFC2,LAT2
SE_02_017100892 chr7:74253125-74307651 Sample_02_0171 Lung IMR-90_proliferating 892 9 1496 108 1 66 351 RFC2,CLIP2,LAT2
SE_02_061700289 chr7:74253170-74293193 Sample_02_0617 HSPC FL CD34+CD38-/lowCD90+ HSPC 289 11 1088 82 1 54 351 CLIP2,RFC2,LAT2
SE_02_118800089 chr7:74253300-74327549 Sample_02_1188 Brain GBM18 89 16 2033 134 2 73 480 CLIP2,RFC2,LAT2
SE_02_118300015 chr7:74253322-74401345 Sample_02_1183 Brain GBM12 15 41 4014 269 3 220 2212 CLIP2,RFC2,LAT2
SE_02_119900069 chr7:74253350-74314060 Sample_02_1199 Brain GBM35 69 12 1671 116 2 66 351 CLIP2,RFC2,LAT2
SE_02_119300022 chr7:74253389-74380934 Sample_02_1193 Brain GBM27 22 31 3468 243 3 186 1718 CLIP2,RFC2,LAT2
SE_02_119400070 chr7:74253973-74327822 Sample_02_1194 Brain GBM28 70 24 2027 133 2 79 480 CLIP2,RFC2,LAT2
SE_02_111900388 chr7:74254514-74312837 Sample_02_1119 Blood KBM7 388 21 1608 111 2 59 235 CLIP2,LAT2,RFC2
SE_02_044400924 chr7:74255558-74324977 Sample_02_0444 Bone osteosarcoma tumor P10 924 15 1895 124 2 65 343 CLIP2,LAT2,RFC2
SE_02_156600930 chr7:74255653-74294960 Sample_02_1566 Dermal Dermal fibroblast 930 8 1089 80 1 47 214 CLIP2,LAT2,RFC2
SE_02_076201549 chr7:74255975-74313695 Sample_02_0762 Podocyte podocyte_CTL 1549 15 1595 110 2 59 214 CLIP2,LAT2,RFC2
SE_02_053301115 chr7:74255979-74307412 Sample_02_0533 Blood vessel Circle of Willis_54y 1115 10 1424 102 1 59 214 CLIP2,LAT2,RFC2
SE_02_005400879 chr7:74256152-74307742 Sample_02_0054 Lung IMR-90_DMSO_1 879 6 1424 101 1 59 214 CLIP2,LAT2,RFC2
SE_02_118700061 chr7:74256158-74327372 Sample_02_1187 Brain GBM16 61 22 1958 126 2 66 343 CLIP2,LAT2,RFC2
SE_02_119200196 chr7:74256171-74326725 Sample_02_1192 Brain GBM26 196 14 1939 126 2 66 343 CLIP2,LAT2,RFC2
SE_02_155500148 chr7:74256321-74308105 Sample_02_1555 Gastrointestinal Stromal GIST-4_KIT e9 148 16 1434 102 1 59 214 CLIP2,LAT2,RFC2
SE_02_078400471 chr7:74256365-74289773 Sample_02_0784 Blood OSU-CLL 471 13 930 66 1 19 162 CLIP2,LAT2,RFC2
SE_02_119600082 chr7:74256372-74328642 Sample_02_1196 Brain GBM32 82 32 1985 130 2 76 343 CLIP2,LAT2,RFC2
SE_02_097700030 chr7:74256379-74381024 Sample_02_0977 Brain 2089_H3.3K27WT 30 36 3393 237 3 179 1593 CLIP2,LAT2,RFC2
SE_02_078200501 chr7:74256380-74320642 Sample_02_0782 Blood MEC1 501 16 1765 117 2 65 343 CLIP2,LAT2,RFC2
SE_02_118400019 chr7:74256383-74381057 Sample_02_1184 Brain GBM13 19 52 3394 237 3 179 1599 CLIP2,LAT2,RFC2
SE_02_125800659 chr7:74256399-74294902 Sample_02_1258 Liver Pancreatic cancer cells derived from liver metastasis 659 9 1065 78 1 47 214 CLIP2,LAT2,RFC2
SE_02_097100762 chr7:74256409-74307988 Sample_02_0971 Brain H3.3K27M_XPS124018_xenograft 762 10 1424 102 1 59 214 CLIP2,LAT2,RFC2
SE_02_120000188 chr7:74256410-74355239 Sample_02_1200 Brain GBM36 188 17 2735 218 3 114 694 CLIP2,LAT2,RFC2
SE_01_007900961 chr7:74256418-74312284 Sample_01_0079 Peyers patch Peyers-patch 961 8 1546 106 2 59 214 CLIP2,LAT2,RFC2
SE_02_062900561 chr7:74256461-74295423 Sample_02_0629 Gastrointestinal Stromal GIST-T1_DMSO 561 10 1078 82 1 47 214 CLIP2,LAT2,RFC2
SE_02_143200525 chr7:74256517-74379193 Sample_02_1432 Bone A673 STAG2 WT 525 39 3333 236 3 178 1515 CLIP2,LAT2,RFC2
SE_02_121100103 chr7:74256533-74326685 Sample_02_1211 Brain GBM21 103 17 1924 125 2 66 343 CLIP2,LAT2,RFC2
SE_02_050400359 chr7:74256551-74317882 Sample_02_0504 Esophagus KYSE510_1 359 20 1689 112 2 65 343 CLIP2,LAT2,RFC2
SE_02_117800191 chr7:74256690-74326364 Sample_02_1178 Brain GBM07 191 12 1906 125 2 66 343 CLIP2,LAT2,RFC2
SE_01_010101269 chr7:74256692-74308302 Sample_01_0101 Pancreas pancreas_54y 1269 7 1425 102 1 59 214 CLIP2,LAT2,RFC2
SE_02_097900254 chr7:74256735-74327101 Sample_02_0979 Brain JN14-BS1_H3.3K27M 254 22 1924 125 2 66 343 CLIP2,LAT2,RFC2
SE_02_119800122 chr7:74256892-74326538 Sample_02_1198 Brain GBM34 122 20 1903 125 2 66 343 CLIP2,LAT2,RFC2
SE_02_141500446 chr7:74256948-74295187 Sample_02_1415 Brain DIPGIV 446 9 1050 78 1 47 214 CLIP2,LAT2,RFC2
SE_02_102900460 chr7:74257635-74314840 Sample_02_1029 Colon HCT116 460 31 1566 107 2 59 214 CLIP2,LAT2,RFC2
SE_02_008600903 chr7:74261848-74296218 Sample_02_0086 Pancreas CAPAN1 903 5 945 73 0 47 214 CLIP2,RFC2
SE_02_136700404 chr7:74262057-74295335 Sample_02_1367 Pancreas Capan1-untreated 404 11 915 67 0 47 214 CLIP2,RFC2
SE_02_042400302 chr7:74262251-74325708 Sample_02_0424 Colon SW620 302 8 1733 110 1 66 343 CLIP2,RFC2
SE_02_136000399 chr7:74262258-74316399 Sample_02_1360 Bladder UMUC1_sonic_pSIN-puro_EV 399 15 1486 99 1 59 214 CLIP2,RFC2
SE_02_035600244 chr7:74262370-74313891 Sample_02_0356 Colon Sw480 244 12 1416 97 1 59 214 CLIP2,RFC2
SE_02_035400383 chr7:74262435-74314119 Sample_02_0354 Colon Colo205 383 8 1425 97 1 59 214 CLIP2,RFC2
SE_02_052100386 chr7:74262569-74313472 Sample_02_0521 Colon SW480 386 10 1397 95 1 59 214 CLIP2,RFC2
SE_02_047800230 chr7:74262616-74326352 Sample_02_0478 Colon normal colon mucosa 230 20 1740 113 1 66 343 CLIP2,RFC2
SE_02_136500466 chr7:74262631-74321046 Sample_02_1365 Pancreas AsPC1-untreated 466 18 1589 105 1 65 343 CLIP2,RFC2
SE_02_071700555 chr7:74262633-74313320 Sample_02_0717 Pancreas HPAFII_GFP_DOX 555 15 1388 95 1 59 214 CLIP2,RFC2
SE_02_047700359 chr7:74262639-74294922 Sample_02_0477 Colon intestinal epithelial organoids_139a 359 12 886 65 0 47 214 CLIP2,RFC2
SE_02_024100380 chr7:74262660-74294016 Sample_02_0241 Colon V456 380 9 860 64 0 47 214 CLIP2,RFC2
SE_02_132001228 chr7:74262750-74281478 Sample_02_1320 Connective Tissue HT1080_EWS-FLI1 1228 6 535 32 0 16 0 CLIP2,RFC2
SE_02_121300329 chr7:74263033-74328045 Sample_02_1213 Brain GBM31 329 22 1782 115 1 74 343 CLIP2,RFC2
SE_02_121200035 chr7:74263314-74328836 Sample_02_1212 Brain GBM30 35 16 1789 117 1 76 343 CLIP2,RFC2
SE_02_020700340 chr7:74264756-74293982 Sample_02_0207 Stomach FU97 340 8 802 60 0 47 214 CLIP2,RFC2
SE_02_155700433 chr7:74265298-74280459 Sample_02_1557 Gastrointestinal Stromal GIST-6_KIT e11/16 433 6 430 22 0 16 0 CLIP2,RFC2
SE_02_103100142 chr7:74265385-74319325 Sample_02_1031 Head and neck SCC1 contol 142 38 1481 98 1 65 343 CLIP2,RFC2
SE_02_103200355 chr7:74265603-74300238 Sample_02_1032 Head and neck SCC1 JQ1 355 17 945 74 0 48 214 CLIP2,RFC2
SE_02_019700404 chr7:74267377-74280368 Sample_02_0197 Stomach SNU1750 404 2 365 19 0 16 0 CLIP2,RFC2
SE_02_102700105 chr7:74267445-74317029 Sample_02_1027 Esophagus KYSE180_1 105 20 1342 92 1 59 214 CLIP2,RFC2
SE_02_022800502 chr7:74267632-74318032 Sample_02_0228 Oesophagus KYSE510 502 8 1375 93 1 65 343 CLIP2,RFC2
SE_02_047600497 chr7:74267926-74293565 Sample_02_0476 iPSCs hiPSC derived hepatocyte-like cells 497 10 700 55 0 47 214 CLIP2,RFC2
SE_02_072000314 chr7:74268202-74313911 Sample_02_0720 Pancreas AsPC1_TP63dN_DOX 314 14 1259 89 1 59 214 CLIP2,RFC2
SE_02_050500204 chr7:74268218-74328587 Sample_02_0505 Esophagus KYSE70_1 204 27 1657 109 1 76 343 CLIP2,RFC2
SE_02_051600201 chr7:74268218-74328647 Sample_02_0516 Esophagus KYSE70 201 25 1657 109 1 76 343 CLIP2,RFC2
SE_02_050600102 chr7:74268277-74379282 Sample_02_0506 Esophagus TE5_1 102 37 3010 216 2 178 1515 CLIP2,RFC2
SE_02_051700083 chr7:74268277-74401776 Sample_02_0517 Esophagus TE5 83 39 3619 242 2 215 2155 CLIP2,RFC2
SE_02_153900405 chr7:74268331-74314792 Sample_02_1539 Nasopharyngeal C666-1 405 21 1282 90 1 59 214 CLIP2,RFC2
SE_02_039601490 chr7:74268394-74342139 Sample_02_0396 Skin NHEK-D 1490 27 2009 161 1 109 578 CLIP2,RFC2
SE_02_138500408 chr7:74269076-74339070 Sample_02_1385 Other iPSCs 408 18 1919 146 1 107 536 CLIP2,RFC2
SE_02_045300643 chr7:74269114-74303312 Sample_02_0453 Neuroblastoma SJNB3 643 8 957 72 0 48 214 CLIP2,RFC2
SE_02_104701832 chr7:74269175-74312844 Sample_02_1047 Peripheral blood CD4+ cells_CTCL1181 1832 8 1209 84 1 57 214 CLIP2,RFC2
SE_02_032200615 chr7:74269215-74295516 Sample_02_0322 Colon Caco-2 615 4 727 59 0 45 214 CLIP2,RFC2
SE_02_113600928 chr7:74269284-74281360 Sample_02_1136 Bone U2OS-anaphase/telophase 928 6 358 22 0 14 0 CLIP2,RFC2
SE_02_088400536 chr7:74269303-74312916 Sample_02_0884 Colon LoVo 536 7 1203 85 1 57 214 CLIP2,RFC2
SE_02_116100388 chr7:74269305-74294183 Sample_02_1161 Embryo H1_shZNF587 388 5 688 54 0 45 214 CLIP2,RFC2
SE_02_023700215 chr7:74269330-74294918 Sample_02_0237 Colon V389 215 11 708 55 0 45 214 CLIP2,RFC2
SE_02_029400282 chr7:74269370-74321677 Sample_02_0294 Pancreatic L3-6_DMSO 282 9 1428 96 1 63 343 CLIP2,RFC2
SE_02_086900651 chr7:74269443-74313922 Sample_02_0869 Fibroblast VH10_NO_UV 651 10 1224 87 1 57 214 CLIP2,RFC2
SE_02_102500103 chr7:74269452-74315235 Sample_02_1025 Esophagus KYSE150 103 13 1267 89 1 57 214 CLIP2,RFC2
SE_02_070500592 chr7:74269454-74313435 Sample_02_0705 Pancreas AsPC1 WT 592 13 1210 85 1 57 214 CLIP2,RFC2
SE_02_120200207 chr7:74269482-74326538 Sample_02_1202 Brain GBM38 207 11 1559 103 1 64 343 CLIP2,RFC2
SE_02_097000063 chr7:74269497-74328740 Sample_02_0970 Brain H3.3K27M_XHSJ019-X1-1-Rx_xenograft 63 17 1619 107 1 74 343 CLIP2,RFC2
SE_02_117900103 chr7:74269498-74328557 Sample_02_1179 Brain GBM08 103 17 1618 107 1 74 343 CLIP2,RFC2
SE_02_096200161 chr7:74269502-74326992 Sample_02_0962 Brain H3.3K27M_Tumor-derived cell-line_DIPGXIIIp11_cells 161 13 1576 103 1 64 343 CLIP2,RFC2
SE_02_096300239 chr7:74269511-74338956 Sample_02_0963 Brain H3.3K27M_Tumor-derived cell-line_G477p6_cells 239 14 1897 146 1 104 509 CLIP2,RFC2
SE_02_071400230 chr7:74269524-74313450 Sample_02_0714 Pancreas SUIT2_MTV 230 9 1208 85 1 57 214 CLIP2,RFC2
SE_02_021101252 chr7:74269532-74307651 Sample_02_0211 Lung MRC-5_NFD_1DPT 1252 7 1050 78 0 57 214 CLIP2,RFC2
SE_02_151900270 chr7:74269540-74285518 Sample_02_1519 Umbilical vein HUVEC_Scr_IL1beta 270 14 466 36 0 14 0 CLIP2,RFC2
SE_02_095400219 chr7:74269545-74327116 Sample_02_0954 Brain H3.3K27WT_2192 219 11 1577 103 1 64 343 CLIP2,RFC2
SE_02_120300368 chr7:74269549-74328255 Sample_02_1203 Brain NB1 368 20 1610 107 1 72 343 CLIP2,RFC2
SE_02_117300152 chr7:74269549-74395028 Sample_02_1173 Brain GBM01 152 47 3391 228 2 186 1824 CLIP2,RFC2
SE_02_158200472 chr7:74269554-74281778 Sample_02_1582 Renal OS-RC-2 472 6 362 24 0 14 0 CLIP2,RFC2
SE_02_120400385 chr7:74269556-74326523 Sample_02_1204 Brain NB2 385 18 1557 103 1 64 343 CLIP2,RFC2
SE_02_143300269 chr7:74269567-74376496 Sample_02_1433 Bone A673 STAG2 null 269 43 2898 213 2 168 1398 CLIP2,RFC2
SE_02_064300512 chr7:74269571-74285715 Sample_02_0643 Mammary gland MDA-MB-436 512 7 470 36 0 14 0 CLIP2,RFC2
SE_02_064200850 chr7:74269574-74286554 Sample_02_0642 Mammary gland MDA-MB-436_20C paclitaxel 850 9 485 36 0 14 0 CLIP2,RFC2
SE_02_111100641 chr7:74269590-74313264 Sample_02_1111 Other HGrC1_SMAD2/3KO 641 21 1199 85 1 57 214 CLIP2,RFC2
SE_02_105500290 chr7:74269595-74312817 Sample_02_1055 Esophagus KYAE1 290 10 1189 84 1 57 214 CLIP2,RFC2
SE_02_120500440 chr7:74269645-74326476 Sample_02_1205 Brain NB3 440 29 1552 103 1 64 343 CLIP2,RFC2
SE_02_096900055 chr7:74269675-74355186 Sample_02_0969 Brain H3.3K27M_PL637 55 18 2364 195 2 112 694 CLIP2,RFC2
SE_02_035500229 chr7:74269737-74314140 Sample_02_0355 Colon HCT15 229 8 1226 87 1 57 214 CLIP2,RFC2
SE_02_155300300 chr7:74269743-74325447 Sample_02_1553 Gastrointestinal Stromal GIST-2_KIT e11 300 21 1517 100 1 64 343 CLIP2,RFC2
SE_02_118100208 chr7:74269744-74328326 Sample_02_1181 Brain GBM10 208 12 1604 107 1 72 343 CLIP2,RFC2
SE_02_083200566 chr7:74269760-74285219 Sample_02_0832 Umblical vein HUVECs_TNF30min 566 12 443 35 0 14 0 CLIP2,RFC2
SE_02_126900807 chr7:74269778-74281122 Sample_02_1269 Bone Im-GCT-4072_G34W-repair_WT_A4 807 4 341 21 0 14 0 CLIP2,RFC2
SE_02_072400309 chr7:74269783-74313171 Sample_02_0724 Pancreatic duct AsPC1_GFP_DOX 309 15 1196 85 1 57 214 CLIP2,RFC2
SE_02_119700023 chr7:74269784-74381046 Sample_02_1197 Brain GBM33 23 43 3021 214 2 177 1599 CLIP2,RFC2
SE_02_132200949 chr7:74269797-74281188 Sample_02_1322 Connective Tissue HT1080_WT 949 4 342 22 0 14 0 CLIP2,RFC2
SE_01_009900336 chr7:74269801-74294906 Sample_01_0099 Colon transverse colon 336 11 693 55 0 45 214 CLIP2,RFC2
SE_02_152000320 chr7:74269810-74283710 Sample_02_1520 Umbilical vein HUVEC_Notch1kd_IL1beta 320 16 402 29 0 14 0 CLIP2,RFC2
SE_02_154100199 chr7:74269811-74315003 Sample_02_1541 Nasopharyngeal HNE1 199 19 1249 88 1 57 214 CLIP2,RFC2
SE_02_105801187 chr7:74269813-74307785 Sample_02_1058 Bone A673_SA2 Rescue 1187 8 1045 78 0 57 214 CLIP2,RFC2
SE_02_101701689 chr7:74269815-74316078 Sample_02_1017 Embryo H9_Mesendoderm 24h_Hydroxyurea 1689 9 1273 89 1 57 214 CLIP2,RFC2
SE_02_158100743 chr7:74269819-74281767 Sample_02_1581 Renal OS-LM1 743 4 355 24 0 14 0 CLIP2,RFC2
SE_02_110700547 chr7:74269825-74308157 Sample_02_1107 Brain SK-N-AS 547 17 1062 79 0 57 214 CLIP2,RFC2
SE_02_126800615 chr7:74269857-74281242 Sample_02_1268 Bone Im-GCT-4072_G34W unedited_U3 615 5 342 22 0 14 0 CLIP2,RFC2
SE_02_135800650 chr7:74269870-74314773 Sample_02_1358 Other IC8-deltaEGF-L1596H_GSI_2h 650 11 1239 88 1 57 214 CLIP2,RFC2
SE_01_010900819 chr7:74269874-74295242 Sample_01_0109 Colon transverse colon_54y 819 10 703 56 0 45 214 CLIP2,RFC2
SE_02_070900215 chr7:74269882-74298904 Sample_02_0709 Pancreas hT85_organoid 215 11 801 66 0 46 214 CLIP2,RFC2
SE_02_071900687 chr7:74269888-74313489 Sample_02_0719 Pancreas SUIT2_TP63dN_DOX 687 14 1204 85 1 57 214 CLIP2,RFC2
SE_02_111500469 chr7:74270338-74281528 Sample_02_1115 Liver HepG2 469 6 344 23 0 4 0 CLIP2,RFC2
SE_02_111300729 chr7:74270356-74281349 Sample_02_1113 Bone U2OS 729 5 338 22 0 4 0 CLIP2,RFC2
SE_02_078100598 chr7:74270377-74289355 Sample_02_0781 Lymphoma Pfeiffer_DMSO 598 1 539 42 0 4 15 CLIP2,RFC2
SE_02_101300128 chr7:74270619-74328115 Sample_02_1013 Brain Lateral temporal lobe_6T_AD 128 21 1592 107 1 62 343 CLIP2,RFC2
SE_02_144700479 chr7:74270676-74294021 Sample_02_1447 Adipose SW872_CAMTA1 479 6 661 54 0 35 214 CLIP2,RFC2
SE_02_001000943 chr7:74271025-74281223 Sample_02_0010 Kidney A-498_emptyvector 943 2 323 21 0 4 0 CLIP2,RFC2
SE_00_003500299 chr7:74271430-74308503 Sample_00_0035 Sigmoid colon sigmoid-colon 299 9 1037 79 0 47 214 CLIP2,RFC2
SE_00_003101207 chr7:74271444-74307666 Sample_00_0031 Placenta placenta 1207 6 1011 77 0 47 214 CLIP2,RFC2
SE_02_147101140 chr7:74271464-74281472 Sample_02_1471 Blood Outgrowth Endothelia BOEC 1140 2 313 21 0 4 0 CLIP2,RFC2
SE_02_147200932 chr7:74271482-74281098 Sample_02_1472 Fetal lung IMR-90 932 3 307 20 0 4 0 CLIP2,RFC2
SE_02_085700247 chr7:74271596-74328587 Sample_02_0857 Glioblastoma Glioblastoma neurosphere cell_HF-3035 247 10 1572 106 1 64 343 CLIP2,RFC2
SE_01_009301138 chr7:74271601-74325507 Sample_01_0093 Aorta ascending aorta 1138 16 1476 99 1 54 343 CLIP2,RFC2
SE_02_026800672 chr7:74271607-74281644 Sample_02_0268 Kidney A-498 672 3 313 22 0 4 0 CLIP2,RFC2
SE_00_005600916 chr7:74271664-74311781 Sample_00_0056 Sigmoid colon sigmoid colon 3y 916 12 1117 82 1 47 214 CLIP2,RFC2
SE_02_003800655 chr7:74271767-74287389 Sample_02_0038 Embryo DE 655 6 462 34 0 4 0 CLIP2,RFC2
SE_02_116000300 chr7:74272129-74312852 Sample_02_1160 Embryo H1_shLuc 300 9 1133 82 1 47 214 CLIP2,RFC2
SE_02_075501463 chr7:74272258-74286339 Sample_02_0755 Embryo ES-derived progenitors_DE FOXA2 -/- 1463 3 419 34 0 4 0 CLIP2,RFC2
SE_02_004300748 chr7:74272381-74287345 Sample_02_0043 Embryo endodermal CyT49_ES_D2 748 6 448 34 0 4 0 CLIP2,RFC2
SE_02_071500381 chr7:74272402-74313901 Sample_02_0715 Pancreas SUIT2_TP63dN 381 10 1155 85 1 47 214 CLIP2,RFC2
SE_01_011400487 chr7:74272462-74314121 Sample_01_0114 Colon HCT116_encode 487 12 1164 85 1 47 214 CLIP2,RFC2
SE_02_055200238 chr7:74275520-74344697 Sample_02_0552 Other SYO1 shCt 238 18 1901 166 1 93 578 CLIP2,RFC2
SE_02_125500529 chr7:74278349-74295450 Sample_02_1255 Bladder Bladder tumor Luminal2 529 8 488 48 0 31 214 CLIP2,RFC2
SE_02_070600349 chr7:74279035-74313432 Sample_02_0706 Pancreas SUIT2 WT 349 14 941 71 1 43 214 CLIP2,RFC2
SE_02_118200067 chr7:74279050-74327818 Sample_02_1182 Brain GBM11 67 12 1331 91 1 56 343 CLIP2,RFC2
SE_02_071100955 chr7:74279221-74298843 Sample_02_0711 Pancreas hN35_organoid 955 11 519 51 0 32 214 CLIP2,RFC2
SE_02_105100604 chr7:74279293-74293739 Sample_02_1051 Esophagus Eso26 604 7 371 38 0 31 214 CLIP2,RFC2
SE_02_071000801 chr7:74279375-74295218 Sample_02_0710 Pancreas hN34_organoid 801 8 414 40 0 31 214 CLIP2,RFC2
SE_02_095800201 chr7:74288680-74326586 Sample_02_0958 Brain H3.3K27M_Tumor_BT245-X0-2-Rx_xenograft 201 10 1023 65 1 50 343 CLIP2,RFC2
SE_02_076500040 chr7:74289476-74404748 Sample_02_0765 Prostate 22RV1-DHT-DMSO_6h 40 37 3117 199 2 200 2343 CLIP2,GTF2IRD1,RFC2
SE_02_087200547 chr7:74291797-74315152 Sample_02_0872 Colon HCT116_siCtrl-5FU 547 10 652 41 1 15 0 CLIP2,RFC2
SE_02_121000206 chr7:74293275-74328412 Sample_02_1210 Brain GBM17 206 9 966 55 1 27 129 CLIP2,RFC2
SE_02_095600700 chr7:74293515-74326312 Sample_02_0956 Brain IDH1_2658 700 8 896 50 1 19 129 CLIP2,RFC2
SE_02_118900408 chr7:74294400-74326550 Sample_02_1189 Brain GBM22 408 7 876 48 1 19 129 CLIP2,RFC2
SE_02_085400239 chr7:74302447-74326598 Sample_02_0854 Glioblastoma Glioblastoma neurosphere cell_HF-2354 239 7 642 32 1 18 129 CLIP2,RFC2
SE_02_006800663 chr7:74302455-74313008 Sample_02_0068 Skin A375_DMSO 663 3 280 14 1 11 0 CLIP2,RFC2
SE_02_079800307 chr7:74302477-74325573 Sample_02_0798 Brain 1919 307 6 606 29 1 18 129 CLIP2,RFC2
SE_02_096800384 chr7:74302583-74326575 Sample_02_0968 Brain H3.3K27M_pcGBM2p18_cells 384 5 638 32 1 18 129 CLIP2,RFC2
SE_02_077101129 chr7:74302738-74357454 Sample_02_0771 Ovary OVCA429_shGRHL2 1129 16 1493 124 2 86 658 CLIP2,RFC2
SE_02_103200537 chr7:74332005-74373489 Sample_02_1032 Head and neck SCC1 JQ1 537 9 1115 94 1 79 881 CLIP2
SE_02_120501261 chr7:74341953-74395080 Sample_02_1205 Brain NB3 1261 15 1421 69 1 79 1246 CLIP2
SE_02_119600952 chr7:74343341-74381068 Sample_02_1196 Brain GBM32 952 11 1019 52 1 70 1021 CLIP2
SE_02_120300837 chr7:74343962-74395164 Sample_02_1203 Brain NB1 837 11 1364 64 1 79 1246 CLIP2
SE_02_121300743 chr7:74344748-74395212 Sample_02_1213 Brain GBM31 743 15 1344 60 1 79 1246 CLIP2
Genomic distribution of SEs associated with CLIP2
Genome Browser

The strength of the tissue affected by the gene

Expression of CLIP2

Cell line (ENCODE) Primary cell (ENCODE)Tissue (NCBI) Normal tissue (GTEx) Cell line (CCLE)